Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2360 ATGAAGGACATACGGTATCAACACCAACTTCAATACATCGCTCTGCTCCAAGAATTTGCACAAGCATTGCAAGCAGTTGTGCCTGATCTGGAATCGCAGCTCCACAAGGGAAGTCCCATTACAACCATGGATTCGAGATGGTGCTGTGCCATCGTAGTTCTCCTGCTTGCGCCGTTCATGGCTTCTTCAGGTTCAGTTATCAGGGGTTTACCTGGCTACACTGGGGATCTACCATTCAAGCTTGAATCTGGGTACATTGGAGTGGGGGAAGAGGAGGCTGTGCAATTATTTTACTTATTTGTGGAGTCTCAAAGAAACCCATCAGAAGATCCACTCCTGCTTTGGTTCGTTGGAGGCCCTGGTTGCTCTGGGCTTTCCGCATTCCTTTTTGAAAATGGGCCTTTAACAATTGACCGCAATTACAGTGGGAATCTTCCAAGACTTGAATTAAACCCGTATGCTTGGACGCAGGTACTCAGCGTCATATACATAGATATACCAGTGGGCACTGGATTTTCTTACTCAAAAACACAAGAAGGCTACCATAGCAGTGATACACTATGGGTGGAGCATGCATATAGTTTTCTACAGAAGTGGTTTATTGATCATCCTAAGTTTGGCTCAAATCCATTTTACATTGGTGGTGGTTCATATTCAACTCTACCTGGCGCTCCCCTTGTTATGAAAGTATATGAAGGTAATCAAGCAGGAAACACTCCATTCATGAATATCAAAGGTTTTGTGTTCGCCAGCCCATTGACTGATACACATCTGGACTGTAACATGAGAGTTGTATATGCACACCAGATGAGTCTTATATCAGATGAGCTCTACGAGTCAATGAAAGCAAGTTGCAATGGTGATTACATCAACATTAATCCAAAAAACGCGAAGTGTGTCTTGGATCATGCAGCCTACTCTAATCTAGTTCGTTACATAAGAATCGATCAAATTTTGGAACCTGTATGTGTTACTACTCCGAAGGAGAATGATAAGATTCTCTTGGAAGATTCATCTGAAGGAATCCTCCCATCATTACAAACCACTTCAGCATTCTGGTGTCGTGGTTATGATCACATCCTCATTAATCTATGGGTAAATGATAAGAATGTCAAGAAGGCTCTTCATGTGAGAAAGGGAACTAAAGTGGAGTTCGAGAGATGCAACAACAGTTTATCATACACAAAGAATCTATATAGTGTTGTTGATTATCATCGCAATTTCACTGACACGAACCTTCAGTCTCTTATTTATTGTGCTGATCTTGACATGTCGGTACCGCATATAAGTACACAAACTTGGATTAAGTCACTGAAATTGGAAATAGATGATCCTTGGCGTGCATGGTTTGTTGAAGGTCAAGTGGCAGGATACACACAAATCTACAAGAAACATAATTACTACTTGACATATGTGGCTGTGAAAGGAGCTGGTCATGTGGCCCAAACATATAAGCCTAAGGAAGTTTTCCAAATGATAGACAGGTGGTTCGAATATTCTCCTATTTAA 1509 0.4155 MKDIRYQHQLQYIALLQEFAQALQAVVPDLESQLHKGSPITTMDSRWCCAIVVLLLAPFMASSGSVIRGLPGYTGDLPFKLESGYIGVGEEEAVQLFYLFVESQRNPSEDPLLLWFVGGPGCSGLSAFLFENGPLTIDRNYSGNLPRLELNPYAWTQVLSVIYIDIPVGTGFSYSKTQEGYHSSDTLWVEHAYSFLQKWFIDHPKFGSNPFYIGGGSYSTLPGAPLVMKVYEGNQAGNTPFMNIKGFVFASPLTDTHLDCNMRVVYAHQMSLISDELYESMKASCNGDYININPKNAKCVLDHAAYSNLVRYIRIDQILEPVCVTTPKENDKILLEDSSEGILPSLQTTSAFWCRGYDHILINLWVNDKNVKKALHVRKGTKVEFERCNNSLSYTKNLYSVVDYHRNFTDTNLQSLIYCADLDMSVPHISTQTWIKSLKLEIDDPWRAWFVEGQVAGYTQIYKKHNYYLTYVAVKGAGHVAQTYKPKEVFQMIDRWFEYSPI 502
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2360 502 Gene3D alpha/beta hydrolase 61 334 IPR029058 -
Glsi08g2360 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 68 486 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 Gene3D - 354 501 - -
Glsi08g2360 502 FunFam Carboxypeptidase 353 502 - -
Glsi08g2360 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 174 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 151 163 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 199 224 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 FunFam Serine carboxypeptidase-like 19 60 329 - -
Glsi08g2360 502 Pfam Serine carboxypeptidase 71 498 IPR001563 GO:0004185|GO:0006508
Glsi08g2360 502 SUPERFAMILY alpha/beta-Hydrolases 67 498 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g2360 Glsi-ChrGlsi08 19787610 19806299 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2360 365 502 Calmodulin-binding Proteins AT2G22960 42.029 3.15e-34 125