Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2359 ATGGATTCGAGATGGTGCTGTGCCATCCTAGTTCTCCTGCTTGCGCCGTTCATGGCTTCTTCAGGTTCAGTGATCAGGGGTTTACCTGGCTACACTGGGGATTTACCATTCAAGCTTGAATCTGGGTACATTGGAGTGGGGGAAGAGGAGGATGTGCAATTATTTTACTTATTTGTGGAGTCCCAAAGAAACCCATCAGAAGATCCACTCCTGCTTTGGTTAGTTGGAGGCCCCGGTTGCTCTGGAGTTTCCGCATTCCTTCTTGAAAATGCTGGAAAAGCCCTCGATAGATCTCTGCAATCGTGCATCACCGCATCGACCATGGAGCTCGAACTGTTGAATGCAAAAGCTTGGGTCACTTTGTTATTGTCTGATTCTGCCACTATGAAATCGAAACCCTTCTTGCTGGCCAAATGGATTGCCCATCTTAAAGCTAAAGCTTCTGCCAGGGTTGGGTCTTCCAAGGCTGTTCCCTTCGCAGCTGCAGCTGCAACTACTTGGCCTTCATGGCCCGAAAAACTGCATCAAAACCCCCCTTCTCCATCTGGACGGCCTTTAACAATTGACCGCAATTACAGTGAGAATCTTCCGAGACTTGAAGTAAACCCGTATGCTTGGACGCAGGTACTCAACGTCATATACATAGATATACCAGTGGGCACTGGATTTTCTTACTCAAAAACACAAGAAGGCTACCATAGCAGTGATACACTATGGGTGGAGCATACATATAGTTTTCTGCAGAAGTGGTTTATTGACCATCCTAAGTTTGGCTCAAATCCATTTTACATTGGTGGTGGTTCATATTCAACTCTACCTGGCGCTCCCCTTGTTATGAAAGTATATGAAGGTAACCAAGCAGGAAACACTTCATTCATGAATATCAAAGGTTTTGTGTTTGCCAGCCCATTCACTGATACACATCTGGACTATAACATGAGAGTTGTATATGCATACCAAATGAGTCTTATATCAGATGAGCTCTACGAGTCAATGAAAGCAAGTTGCAATGGTGATTACGTCAACATTAATCCAAAAAACACAAAGTGTATCTTGGATCATGCAGCCTACTCTGATCTAGTTCGTTACATAAGCATCAATCAAATTTTGGAACCTGTATGTGTTACTACTCCCAAGGAGAATGATAAGATTCTCTTGGAAGATTCATCTGAAGGAATCCTCCAGTCATTACAAAGCACTTCGGCATTCTGGTGTCGTGGTTATGATCACATGCTCGTTAATCTATGGGCAAATGATAAGAATGTCAGGAAGGCTCTTCATGTGAGAAAGGGAACTAAAGTGGAGTTCGATGGATGCAACAACAGTTTATCATACACAACGAATCTATATAGTGTTGTTGATTATCATCGCAATTTCACTCATACAAACCTTCATTCTCTTATTTATTGTGCTGATCTTGACATGTCGGTACCGCATATAAGTACACAAACTTGGATTAAGTCATTGAAATTGGAAATAGATGATCCTTGGCGTGCATGGTTTGTTGAAGGTCAAGTGGCAGGATACACACAAATCTACAAGAAACATAATTACTACTTGACATATGTGGCTGTGAAAGGAGCTGGTCATGTGGCCCAAACATATAAGCCTAAGGAAGTTTTCCAAATGATAGACAGGTGGTTCGAATATTCTCCTATTTAA 1662 0.4236 MDSRWCCAILVLLLAPFMASSGSVIRGLPGYTGDLPFKLESGYIGVGEEEDVQLFYLFVESQRNPSEDPLLLWLVGGPGCSGVSAFLLENAGKALDRSLQSCITASTMELELLNAKAWVTLLLSDSATMKSKPFLLAKWIAHLKAKASARVGSSKAVPFAAAAATTWPSWPEKLHQNPPSPSGRPLTIDRNYSENLPRLEVNPYAWTQVLNVIYIDIPVGTGFSYSKTQEGYHSSDTLWVEHTYSFLQKWFIDHPKFGSNPFYIGGGSYSTLPGAPLVMKVYEGNQAGNTSFMNIKGFVFASPFTDTHLDYNMRVVYAYQMSLISDELYESMKASCNGDYVNINPKNTKCILDHAAYSDLVRYISINQILEPVCVTTPKENDKILLEDSSEGILQSLQSTSAFWCRGYDHMLVNLWANDKNVRKALHVRKGTKVEFDGCNNSLSYTTNLYSVVDYHRNFTHTNLHSLIYCADLDMSVPHISTQTWIKSLKLEIDDPWRAWFVEGQVAGYTQIYKKHNYYLTYVAVKGAGHVAQTYKPKEVFQMIDRWFEYSPI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2359 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 214 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 250 275 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 225 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 520 533 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 FunFam Carboxypeptidase 404 553 - -
Glsi08g2359 553 SUPERFAMILY alpha/beta-Hydrolases 25 90 IPR029058 -
Glsi08g2359 553 MobiDBLite consensus disorder prediction 170 189 - -
Glsi08g2359 553 Pfam Serine carboxypeptidase 196 549 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 Pfam Serine carboxypeptidase 29 90 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 537 IPR001563 GO:0004185|GO:0006508
Glsi08g2359 553 Gene3D alpha/beta hydrolase 19 119 IPR029058 -
Glsi08g2359 553 Gene3D alpha/beta hydrolase 183 385 IPR029058 -
Glsi08g2359 553 SUPERFAMILY alpha/beta-Hydrolases 180 549 IPR029058 -
Glsi08g2359 553 Gene3D - 405 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2359 Glsi-ChrGlsi08 19771071 19783080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2359 412 553 Calmodulin-binding Proteins AT2G22960 41.549 1.21e-33 124