Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2349 ATGCATGACCTCGTAAATGATCTAGCCAGAGTCGTATCTAGTAAAAGTTGTATCAACTTTGAAGGCAATGAAATCTCAAACAATGTTCGTCATTTATCATATCTTAGTACAGAATATGATAGCTCTAAAAAATTTGAGAGCTTGTATGAACTCAAGTATTTGAGGACTTTTCTACCACGTAACCCTTATGATTTGCCACATTGCTTAACCAAAACGGTGCCACATGATTTGCTGCCAAGACTAAAATGTTTAAGAGTACTATCTTTTTCAAGGTATAGAAATATCACTGAGCTCCCCAATTCAATTGGCAATTTGGTGCACTTGCGATATCTAGACCTTTCCTTCACTTCAATAAAGAAGTTGGCTGATGCAATCTTTACACTTTACAATTTGCAGACCTTGCTATTATCTAATTGTCAGTCTTTAGTTGAATTGCCATCGCAGATAGAAAATCTGACTAATCTACGCTATCTTGACATAAGTGGCACTAGATTAGAGGAGATGCCAACACAAATTAGCACACTACAAAATCTTCATAGTTTGAGTACTTTTGTTGTGGGTAGACAAGAAGATGGATTGAGGGTAAAAGAGTTAAAAAAGTTTCCTTATCTACAGGGTAAGCTTTCCATTTTGAATCTGCAAAATGTTGTTGATTCCATGGATGCTTTTGAGGCTGAATTGAAGAGCAAAGAGCAACTTGAGGAGTTGGGGTTGGAATGGGGCAGCCATGTTGAGGATTCACAAATTGCAAAAGATGTACTTGGCAAGCTACAGCCATCAACAAATTTGAGGAAACTGACCATCAAATACTACGGTGGCACTAGCTTTCCAAATTGGGTGGGAGATTCTTCATTTTCAAAAATTACTTTCCTGCGTATCAGTGATTGTAACTATTGCTTATCACTCCCACCATTTGGACAATTATCTTATCTCAAGAAGCTGTGCATTGCAAGGATGGAATTGGTACAGACAATTGGTCATGAGTTTTACGGCAACAAAGTAGACTCCTCTTCATTTCAATCCTTGGAACGTCTGGAATTTAGCGAGATGCCAAATTGGGAGGAATGGCTACCATTTGAAGGTGAAGGTACCAAATTACCTTTTCCTTGTCTTAAAAGTTTGAGTTTAGAGAAGTGTCCTAAGTTGAGGGGAGACTTGCCCAACCATCTTCCTTCATTGACAGAAGTTCACATATCTGAATGCAATCAGCTAGAGGACAAATCATTAGCTCTGCACTGGATCACATCAATTGAAAAATTAACAATTACAGAGGGTGGACATGGCTTGCTGTCAATTCTTGATAACGATTCTCAGTGCTCACTAAAACACGTAGGCATTGAGAAGTGTGACAGCTTGCAGTCTTTGCCGAGAATGATACTTGACAGCAATTGCCTTCAAGAACTGGAACTCAAAAATATCCAATCCCTCACGTCCTTTCCAACAGATGGTTTGCCCACTTCGTTGCAAAGACTTGAAATTGAGAACTGTGAGAAATTAGAATTCCTACCTGAGGAAGCTTGGAAAAATTACACGTCACTTGAAAGTTTGGTAATTAAGAATAGCTGCGATTCGTTGACATCATTTCCATTAGATTGTTTCCTTGGGCTTAAACGTCTTACTGTTAACGGTTGTCTTAATTTGCAATCCTTTACACGAGTTGGAGGCTCAGCTCCTAATTTGGAAGTCTTTGAAGTCATTAAATGCGAAAGAATTAAATCGATGTCAGAAGTACAGTTTGACACCCTCACGGCCCTGCTATGGTTGACTCTTTGGGGTCTTCCAAATCTTGAGTCGTTGCCTCAATGTGGTTTGCCTTCTAACTTAAGAGTAATTAGGGTAAGGAACTGTAAAGGACTATCATCAATGGCTATAGCTGGCTGGGGTTTTCAACGGCTCACTTCACTCTTGTATCTTGATGTTGGCGGTGATGGAGGTGATGAGATAGTCCATAATTTGCTGAAGGAGCAATTGCTGCCCACTTCTCTTGATAGACGAGGTAGAATTGCTTTGCTTCAAAGCAGGCTACTTGTGGTAGAGGTTGAGAAAGAATTATGCAGTTCAAAGGGCTGACAAAAGCTCCATTGCAAGATGCCCACAAGAAGATCTCGCTTGTCGACTTCTAGATGCTGTCAAGGATCATCCAGAAAAAGGAAAACAGTTACAAAGGATGTAGTTGAAACCATGGTATACTTGAATGAGATAAATGCCAACATGGTTCGTACACAAACTTGGCCTCCACCAAGCAGCTCAACAATAGAAAGGCTTGTTATTAACCTACAAATCAAGACCAAAGCTGCTGCTCTTCATCAAGGTCTTATGTCTGTTGATTCATTGTGGGATACTCAGAGGTGTGTTTTGCTTTCATGCTCTGTCTGTACTTGGAGTGCACCCCTATTTCTCCCTTTGATGCAATATTTACTTATCAAGAAGCTAGAAGGTGCCCGGGTCTATATTAATTATGCCTACTCAGATGCAAGTTTTAAAGCTCCTAATTTTGTCATATTGGATTATGAATTTGTTAGCAAGATGATAGCCTATATGGAACTGAGCAAAGATTGTGGCAGGAGAGATGCCACTTTGGACCTCCAGCTACTTGATAATTCGACTGTGAAGAAGATGAAGGAGACAGTAATGGAAGTTGATGAACTGAACCATGATGTATTATATATTGCCAATGGAAGGAAAGACAATAGTGCGGATTCCTGCCACTCCTCTACATTTTTGTCCCAATTCCCTTTTTCCATGGAAGTACACTGA 2757 0.3983 MHDLVNDLARVVSSKSCINFEGNEISNNVRHLSYLSTEYDSSKKFESLYELKYLRTFLPRNPYDLPHCLTKTVPHDLLPRLKCLRVLSFSRYRNITELPNSIGNLVHLRYLDLSFTSIKKLADAIFTLYNLQTLLLSNCQSLVELPSQIENLTNLRYLDISGTRLEEMPTQISTLQNLHSLSTFVVGRQEDGLRVKELKKFPYLQGKLSILNLQNVVDSMDAFEAELKSKEQLEELGLEWGSHVEDSQIAKDVLGKLQPSTNLRKLTIKYYGGTSFPNWVGDSSFSKITFLRISDCNYCLSLPPFGQLSYLKKLCIARMELVQTIGHEFYGNKVDSSSFQSLERLEFSEMPNWEEWLPFEGEGTKLPFPCLKSLSLEKCPKLRGDLPNHLPSLTEVHISECNQLEDKSLALHWITSIEKLTITEGGHGLLSILDNDSQCSLKHVGIEKCDSLQSLPRMILDSNCLQELELKNIQSLTSFPTDGLPTSLQRLEIENCEKLEFLPEEAWKNYTSLESLVIKNSCDSLTSFPLDCFLGLKRLTVNGCLNLQSFTRVGGSAPNLEVFEVIKCERIKSMSEVQFDTLTALLWLTLWGLPNLESLPQCGLPSNLRVIRVRNCKGLSSMAIAGWGFQRLTSLLYLDVGGDGGDEIVHNLLKEQLLPTSLDRRGRIALLQSRLLVVEVEKELCSSKGXQKLHCKMPTRRSRLSTSRCCQGSSRKRKTVTKDVVETMVYLNEINANMVRTQTWPPPSSSTIERLVINLQIKTKAAALHQGLMSVDSLWDTQRCVLLSCSVCTWSAPLFLPLMQYLLIKKLEGARVYINYAYSDASFKAPNFVILDYEFVSKMIAYMELSKDCGRRDATLDLQLLDNSTVKKMKETVMEVDELNHDVLYIANGRKDNSADSCHSSTFLSQFPFSMEVH 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2349 918 Gene3D Ribonuclease Inhibitor 52 427 IPR032675 -
Glsi08g2349 918 SMART LRR_typ_2 152 175 IPR003591 -
Glsi08g2349 918 SMART LRR_typ_2 105 128 IPR003591 -
Glsi08g2349 918 Gene3D Ribonuclease Inhibitor 440 645 IPR032675 -
Glsi08g2349 918 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Glsi08g2349 918 SUPERFAMILY L domain-like 1 422 - -
Glsi08g2349 918 Coils Coil 213 233 - -
Glsi08g2349 918 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 439 568 - -
Glsi08g2349 918 SUPERFAMILY RNI-like 285 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2349 Glsi-ChrGlsi08 19494900 19504801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2349 95 189 WRKY Transcription Factor Family AT4G12020 42.708 6.49e-10 61.6