Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2329 ATGCACGACCTCGTAAATGATCTAGCCAGAGTTGTATCTGGTAAAAGTTGTCTGAACTTTGAAGGCACTGAAATTCCAAACAATGTTCGTCATTTATCATATCTTAGAACAGATTATGATGGCTCAAAAAAATTTGAGAGCTTGTATGAACTCAAGTATTTGAGGACTTTCCTACCACGTAACCCTTATGGTGTGTCATACTTAACCAAAACGGTACCACATGATTTTCTTCCAAGAGTAAAATGTTTAAGAGTACTATCTTTGTCAAATTATGCAAATATCACTGAGTTGCCCAATTCAATTGGCAATTTGGTGCACTTGCGATATCTAGACCTTTCCAACACTTCAATAAGAAAGTTGGCTGATGCAACTTTTACACTTTATAATTTGCAAACCTTGATATTATCATCCTGTTGGAATTTGATTGAATTGCCATCACAAATTGGCAATCTAATTAATCTACGTTATCTTGTTATTAGTAACACTAAATTGAAGGAGATGCCAACACAAATCAGCATGCTACACAATCTGCAAACCTTGAAGTGTCCTAAGTTGAGGGGAGACTTGCCCAACCATCTTCCTTCATTGACAGAAGTTTATATATCTGAATGCAATCAGCTAGAGGAAAAATCATCAGCTCTGCACTGGATCACATCAATTGAAAGATTAACAATTAGAGAAGGGGGACGTGGCTTATTGTGCGTTCTTGATAACGATTCTCAGTGCTCACTAGTACTACTAAAAATTGAGAAGTGCGACAGCTTACAGTCTCTGCCAAGAATGATACTAGGCAGCAATTGCCTTCAAGAACTGGAACTTAGAAATATCCAATCCCTCACGTCCTTTCCAACAGATGGGTTGCCCACTTCGTTGCGAAGACTTACAATTTGGAACTGTGAGAAATTAGAATTCCTACCTCAGGAAGTTTGGAAAAATTACACGTCACTTAAAGATTTGAGTATTTATAATAGCTGCTGTTCGTTGACATCATTTCCATTAGATTGTTTCCCTGTGCTTAAACGTCTTTATGTTAGCAGTTGTCCTAATTTGGAATCCTTTACACAAGTTGGAGGCTCTGCTCCTAATTTGGAAGTCTTTTACGTCTTTCACTGTGAAAGAATTAAGTCAATGTCAGAAGTACAGTTTGACACCCTCACGGCCCTTCGAGCGTTTACCCTTGATCGTCTTCCAAATCTTGAGTCGTTGCCTCAATGTGGTTTGCCTTCTAACTTAAGATCAATTGATGTAAATAACTGTAAAGGACTATCATCAATGGCTATAGCTGGCTGGGGTTTTCAACGGCTCACTTCACTCTCGCATCTTTCTATTATCGGTGATGGAGGTGATGAGATAGTCCATAATTTGCTGAAGGAGCAATTGCTGCCCACTTCTCTTGTGTGTCTCCATATCAAAGATCTTTCGTATATAAAATTATTGGAAGGAAAAGGGCTTCGACTTCTGACTTCTCTGGAAGAGCTCTGGATCTGGAATTGTCCAAACCTTGAGTCCTTGCCCGAAGACGACCTGCCATCCTCTCTTTTGCGACTATGGATTAACCAGTGTCCTAGATTAGAAGAAAGCAATTCATGGTGGCAGGAATTGCTATCCGAAGTTAGTGGTATTTATGACGAAGAACACTGGATCTCCTGTACATATTTGCTTATAACCTTCGGGCACAGAGAAGATGGAAAGGCTGAAACTGACAAAAGCTTCATTGCAAGATGCCCACAAGAAGATCTCGCTTGTGGACTTCTAGATGCTGTCAAGGGAATCAAGCCAATAGTGTTAATAGGATCAGCCGGAGAAAGGAAAACAGTTACAGAGGATGTGGTTGAAACCATGACATACTTGAATGAGAAGCCACTCATTCTGGCTCTCTCCAACCCAACTTCGCAATTTGAGTACACCGCTAAAAAAATCTTATACATGGATGGAGCAAGGTCAAGGCAAAAGAAAATCCAAATGAAGGCCCAGTCACCTAGAAATGTCCTGGAATCAAAGAAGCTTTGCTCTCTATCTTGTATATCAGTTCATATTTTGCCCAAGATATTTTGTGCCTATTGTTCTGCTGTATTTGCACAATTTGGAGCTTAA 2094 0.3968 MHDLVNDLARVVSGKSCLNFEGTEIPNNVRHLSYLRTDYDGSKKFESLYELKYLRTFLPRNPYGVSYLTKTVPHDFLPRVKCLRVLSLSNYANITELPNSIGNLVHLRYLDLSNTSIRKLADATFTLYNLQTLILSSCWNLIELPSQIGNLINLRYLVISNTKLKEMPTQISMLHNLQTLKCPKLRGDLPNHLPSLTEVYISECNQLEEKSSALHWITSIERLTIREGGRGLLCVLDNDSQCSLVLLKIEKCDSLQSLPRMILGSNCLQELELRNIQSLTSFPTDGLPTSLRRLTIWNCEKLEFLPQEVWKNYTSLKDLSIYNSCCSLTSFPLDCFPVLKRLYVSSCPNLESFTQVGGSAPNLEVFYVFHCERIKSMSEVQFDTLTALRAFTLDRLPNLESLPQCGLPSNLRSIDVNNCKGLSSMAIAGWGFQRLTSLSHLSIIGDGGDEIVHNLLKEQLLPTSLVCLHIKDLSYIKLLEGKGLRLLTSLEELWIWNCPNLESLPEDDLPSSLLRLWINQCPRLEESNSWWQELLSEVSGIYDEEHWISCTYLLITFGHREDGKAETDKSFIARCPQEDLACGLLDAVKGIKPIVLIGSAGERKTVTEDVVETMTYLNEKPLILALSNPTSQFEYTAKKILYMDGARSRQKKIQMKAQSPRNVLESKKLCSLSCISVHILPKIFCAYCSAVFAQFGA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2329 697 Gene3D - 545 688 - -
Glsi08g2329 697 Pfam Malic enzyme, NAD binding domain 581 643 IPR012302 GO:0051287
Glsi08g2329 697 SUPERFAMILY L domain-like 278 535 - -
Glsi08g2329 697 Gene3D Ribonuclease Inhibitor 50 405 IPR032675 -
Glsi08g2329 697 SMART Malic_M_2 534 687 IPR012302 GO:0051287
Glsi08g2329 697 Gene3D Ribonuclease Inhibitor 406 539 IPR032675 -
Glsi08g2329 697 SMART LRR_typ_2 104 127 IPR003591 -
Glsi08g2329 697 SMART LRR_typ_2 151 174 IPR003591 -
Glsi08g2329 697 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 244 537 - -
Glsi08g2329 697 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 564 643 IPR036291 -
Glsi08g2329 697 SUPERFAMILY L domain-like 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2329 Glsi-ChrGlsi08 18961512 18968013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2329 94 208 WRKY Transcription Factor Family AT4G12020 37.815 8.58e-10 60.5