Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2328 ATGCATGACCTCGTAAATGATCTAGCCAGAGTCGTATCTAGTAAAAGTTGTATCAACTTTGAAGGCAATGAAATCCCAAACAATGTTCGTCATTTATCATATCAACAAACATGGTGTGATGGCTCTAAAAAATTTGAGAGCTTGTATGAACTCAAGTATTTGAGGACTTTTCTACCACGTAACCCTTATTATGGTCGGTTATCTTACCTAACCAAAACGGTACCACATGATTTGCTGCCAAGATTAAAATGTTTAAGAGTACTATCTTTTTCACATTATAGAAATATCACTGAGCTCCCCAATTCAATTGGCAATTTGGTGCACTTGCGATATCTAGACCTTTCTTTCACTTCAATAAAAAAGTTGGCTGATGCACTCTTTACACTTTACAATTTGCAGACGTTGCTATTATCCAATTGTCAGTCTTTAGTCGAATTGCCATTGCAGATAGAAAATTTGACTAATCTACGCTATCTTGACATAAGTGGCACTAAATTGGAGGAGATGCCAACACAAATTAGCACACTACAAAATCTCCATGGTTTGAGTACTTTTGTCGTGGGTAAACAACAAGATGGGTTGAGGGTGAAAGAGTTAAAAAAGCTTCCTCATCTACAGGGCAAGCTTTCCATTTTGAAGCTACAAAATGTTGTTGATTCAATGGATGCTTTTGAGGCTGACTTGAAGAGCAAAGAGCAAATTGAGAGGTTGGTGTTGGAATGGGGTACTGATACTGATGATTCTCAAATTGCTAAAGATGTACTTAACAAGCTACGGCCATCAACAAATTTGAGGAATCTGACAATCAAATACTATGGTGGCACTAGCTTTCCAAATTGGGTGGGAGATTCTTCATTTTCAAAAATTACTTTCCTGTGTATTAGTGATTGTAACTATTGCTTATCACTCCCGCCATTTGGACAATTACCTTATCTTAAGGAGCTTTGGATTAGAAGGATGAAATTGGTACAGACAATTGGTCACAATTTTTATTGCAACGAAGTAGACTTCTCTTCATTTCAATCATTTCCATCCTTGGAAAGTCTGGAATTTAGCGAGATGCCAAATTGGGAGGAATGGCTACTATTTGAAGGTGAAGGTACAACCAAATTACCTTTTCCTTGTCTTAAAAGTCTGCATTTAATCAACTGTCCTAAGTTGAGGGGAGACTTGCCCAACCATCTTCCTTCATTGATAAAGGTTTATATATCTGAATGCAATCAGCTAGAGGAAAAATCATCGGGTCTCCACTGGATCACATCGATTGAACAATTATCAATTATAGAAGGGGGACATGGCTTATTGAGGGTTCTTGATAACGATTCTCAGTGCTCACTAAAAGACCTATTCATTAAGAAGTGTGACAACTTGCAGTCTTTGCCAAGAATGATACTTGGCAGCAATTGCCTTCAAGGTTTGTATCTCTGGAATATCCAATCTCTCATGTCCTTTCCAACAGATGGTTTGCCCACTTCGTTGCGAAGACTTACAATTGAGAACTGCGACAGCTTACAGTCTCTGCTAAGAATGATACTAGGCAGCAATTGCCTTCAAGAACTGGAACTCAGAAATATCCAATCTCTCATGTCCTTTCCAACAGATGGTTTGCCCACTTCGTTGCGAAGACTTACAATTGAGAACTGCGACAGCTTACAGTCTCTGCCAAGAATGATACTAGGCAGCAATTGCCTTCAACGACTGGAACTCAGAAATATCCAATCCCTCACGTCCTTTCCAACAGATGGTTTGCCCACTTCGTTGGGAAGTCTTAGAATTGAGAACTGTGAGAAATTAGAATTCCTACCTCAGGAAGCTTGGAAAAATTACACGTCACTTGAATATTTGAGAATTGATAATAGCTGCCATTCGTTGACATCATTTCCATTAGATTGTTTCCCTAGGCTTAAATATCTTTATGTTAAAGGTTGTCCTAATTTGGAATCCTTTACACAAGTTGGAGGCTCTGCTCCTAATTTGGAACACTTTCACGTCTACAATTGCGAAAGAATTAAATCAATGTCAGAAGTACAGTTTGACACCCTCACAGCCCTTAAATCCTTGGGACTTGATCATCTTCCAAATCTTGAGTCGTTGCCTCAATGTGGCTTGCCTTCTAACTTGAGAGAAATTTCAGTACATAACTGTAAAGGACTATCATCAATGGCTATAGCTGGCTGGGGTTTTCAACGGCTCACTTCACTCTCGAAATTTTATGTTGGCGGTGATGGAGGTGATGAGATAGTCCATAATTTGCTGAAGGAGCAATTGCTGCCCACTTCTCTTGCGATTCTCGACATCCGTAGCCTTCGTAATACAAAATTATTGGAAGGAAAAGCGCTTCGACATCTGACTTCTCTGGAAGTGCTCTGGATCTCGGAATGTCCAAACCTTGAGTCCTTGCCCGAAGACGACCTGCCATCCTCTCTTGTGCGACTAAACATTCGGCAGTGTCCTAGATTAGAAGAAAGAAGTAATAATAGCATGAGCTCTGAGATAATGGGAAGCATAGCAAGTGAGCTAGAAGTTCCCTGGAAAGTGCCTCAGATCAGGAAATCTTGA 2559 0.3978 MHDLVNDLARVVSSKSCINFEGNEIPNNVRHLSYQQTWCDGSKKFESLYELKYLRTFLPRNPYYGRLSYLTKTVPHDLLPRLKCLRVLSFSHYRNITELPNSIGNLVHLRYLDLSFTSIKKLADALFTLYNLQTLLLSNCQSLVELPLQIENLTNLRYLDISGTKLEEMPTQISTLQNLHGLSTFVVGKQQDGLRVKELKKLPHLQGKLSILKLQNVVDSMDAFEADLKSKEQIERLVLEWGTDTDDSQIAKDVLNKLRPSTNLRNLTIKYYGGTSFPNWVGDSSFSKITFLCISDCNYCLSLPPFGQLPYLKELWIRRMKLVQTIGHNFYCNEVDFSSFQSFPSLESLEFSEMPNWEEWLLFEGEGTTKLPFPCLKSLHLINCPKLRGDLPNHLPSLIKVYISECNQLEEKSSGLHWITSIEQLSIIEGGHGLLRVLDNDSQCSLKDLFIKKCDNLQSLPRMILGSNCLQGLYLWNIQSLMSFPTDGLPTSLRRLTIENCDSLQSLLRMILGSNCLQELELRNIQSLMSFPTDGLPTSLRRLTIENCDSLQSLPRMILGSNCLQRLELRNIQSLTSFPTDGLPTSLGSLRIENCEKLEFLPQEAWKNYTSLEYLRIDNSCHSLTSFPLDCFPRLKYLYVKGCPNLESFTQVGGSAPNLEHFHVYNCERIKSMSEVQFDTLTALKSLGLDHLPNLESLPQCGLPSNLREISVHNCKGLSSMAIAGWGFQRLTSLSKFYVGGDGGDEIVHNLLKEQLLPTSLAILDIRSLRNTKLLEGKALRHLTSLEVLWISECPNLESLPEDDLPSSLVRLNIRQCPRLEERSNNSMSSEIMGSIASELEVPWKVPQIRKS 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2328 852 Gene3D Ribonuclease Inhibitor 724 840 IPR032675 -
Glsi08g2328 852 Gene3D Ribonuclease Inhibitor 582 723 IPR032675 -
Glsi08g2328 852 Gene3D Ribonuclease Inhibitor 435 574 IPR032675 -
Glsi08g2328 852 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 515 824 - -
Glsi08g2328 852 SMART LRR_typ_2 783 807 IPR003591 -
Glsi08g2328 852 SMART LRR_typ_2 106 129 IPR003591 -
Glsi08g2328 852 SMART LRR_typ_2 153 176 IPR003591 -
Glsi08g2328 852 SUPERFAMILY L domain-like 444 818 - -
Glsi08g2328 852 SUPERFAMILY L domain-like 1 427 - -
Glsi08g2328 852 Gene3D Ribonuclease Inhibitor 46 434 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2328 Glsi-ChrGlsi08 18950640 18954136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2328 96 182 WRKY Transcription Factor Family AT4G12020 42.045 5.77e-09 58.2