Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2319 ATGGCTGAGGTAATTATCTCCATTGCATCAAAAGTTGGAGAACACTTGGTGGATCCAGTGATCCGTCAAGGACAATACTTGTTATGTGTCAGTAAGATTAACAAAAGTCTTGAGAATAGAAAGAAAGAGCTCGTGTCAACAAGAGATGGTGTGCAGAAACGCGTTGAAGAAGCAAAGAAAAAAACTGAAAAAATTGAAAATTCTGTGGAGAAGTGGTTAAGTGAAGTAAATAATCTACTGGAACAGGTGGAGAATCTGGAACAAGAAGTGAAAACAAACAAAAGCTGTTTACCAGAATGGTGTCCCAGTTGGAGAAGATATCAACTATGCAAGCAAGTGGCAAAGAAGACAAAGATAATAACAGAGCTCAACGTTAATAGCAAGTTTGAGCCATTTTCTCGCCTTGTTTCACTTCCAAAAATTGAATACTTTTCTTCAGGAAATTTTACATTCTTTAAATCTACAAGATTGGCTTATAATCAACTTCTGGAGGCCATACAAGATGATAGCACCTATATGATAGGTATGTATGGGATGGGAGGATCTGGAAAAACAACCTTGGCGAAAGAAGTGGGCAAAAAAGCTAAGGAGTTAAAGCATTTTGATCAGGTTGTATTCACTACTGTGTCTCAGACTCCAAATGTCATGAAGATTCAAGACGAAATTGCTGATCTGTTGGGTCTAAAACTGGATGAAAAGACTGAAACTGCAAGAGCACAAAGAATATCATTAAGATTACGAAGCGGAGAGCGAATTCTTATAATCTTAGATGATGTTTGGACAAAGCTCAACCTTGAAGATATAGGGATTCTTTTTCCCAGTAATCTTAAGAGCTGCAAGGTACTTCTAACCACACGTCGTAGACAAGTATGTGTTTTGATGGATTGCCAAAGGAAAATTCCATTGGATCTCTTATCAGAAGAGGAAACTTGGAGTTTGTTCCAAAAGTTGGCGGGTATTGGCGATGACTCCTTCCTTGCTTTACATGGTGTGGCACAAGAAGTTGCTGCAGAATGTAAGGGACTACCTATTGCAATTGAAGCTTTGGCAACCTCCTTGAAAGGAAAATCTATTGATGAGTGGAAGGTAGCATTGAAAAGATTGAGGGATTCGAAACCAATTGATGTGGAAGAAGGGGTGAGGGATGCTTTCACTTGTCTTCAATTAAGCTATGATTATTTGAAAAGTAGAGAAGCCAAATCATTGCTGTTGATGTGTAGTATGTTTCCTGAAAATCATGAAATTTTTATTGAAGATTTGTTTAAGTATGGAATAGGGTTAGGGCTATGCGGGGAAGATGGGACGAATGACAGCCAATCGAGTATTGAAGTTGCAATTCTTTCTCAGATAATTGAAGACATTAAAAATCGCGGAGTAGCAAATACATCTGATCTTCAGGGCGATGGCCTTAATAAGGAACAGCAGGAGGCCATTGTTGCTGCTCTTTCTCAATTGCTAGATGACATTAAAAATTCCAGAATAGAAAACATTTCTCATCTTCAGAGAGCTGGACTTGACAAGGACCAACAAGAGGCTATGGCCTCGGCATTAGAGAAACTACAGGCCTCTGTCGAAACTCATAGTGGAGAGGTGATCGAGTTTGTGCTTCCCAAATTGAGAGATTTGATGCTCCAAAGATTGCCCAGCCTCATTGACATTTGCGGAGGCTTTCAGTATCAGTTTCAGTTGCAATTTCCGGCTTTGGAATTCTTTGAAGTGAAGCGTTGCCCCAAATTTTCCTCAACCACCATTGCCACTCTCAACAACTTCTGGCGTGCACGCCAAAGCTACAACAGAGATGACGAGATAGAAGAAGAAGAAGATGACGATGTTGATTATGATACTGATTTTTTTGATGTGGATTGTGAGGGTGATCCTGAAGAAGAAGAATATGATATTGAGGAAGAAGGTGAAGACGATGATGACGAGGAAGAATAA 1938 0.3958 MAEVIISIASKVGEHLVDPVIRQGQYLLCVSKINKSLENRKKELVSTRDGVQKRVEEAKKKTEKIENSVEKWLSEVNNLLEQVENLEQEVKTNKSCLPEWCPSWRRYQLCKQVAKKTKIITELNVNSKFEPFSRLVSLPKIEYFSSGNFTFFKSTRLAYNQLLEAIQDDSTYMIGMYGMGGSGKTTLAKEVGKKAKELKHFDQVVFTTVSQTPNVMKIQDEIADLLGLKLDEKTETARAQRISLRLRSGERILIILDDVWTKLNLEDIGILFPSNLKSCKVLLTTRRRQVCVLMDCQRKIPLDLLSEEETWSLFQKLAGIGDDSFLALHGVAQEVAAECKGLPIAIEALATSLKGKSIDEWKVALKRLRDSKPIDVEEGVRDAFTCLQLSYDYLKSREAKSLLLMCSMFPENHEIFIEDLFKYGIGLGLCGEDGTNDSQSSIEVAILSQIIEDIKNRGVANTSDLQGDGLNKEQQEAIVAALSQLLDDIKNSRIENISHLQRAGLDKDQQEAMASALEKLQASVETHSGEVIEFVLPKLRDLMLQRLPSLIDICGGFQYQFQLQFPALEFFEVKRCPKFSSTTIATLNNFWRARQSYNRDDEIEEEEDDDVDYDTDFFDVDCEGDPEEEEYDIEEEGEDDDDEEE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2319 645 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 444 - -
Glsi08g2319 645 Gene3D - 148 300 IPR027417 -
Glsi08g2319 645 Gene3D - 304 395 IPR042197 -
Glsi08g2319 645 MobiDBLite consensus disorder prediction 601 645 - -
Glsi08g2319 645 FunFam Probable disease resistance protein At1g61300 153 299 - -
Glsi08g2319 645 Coils Coil 34 96 - -
Glsi08g2319 645 Pfam NB-ARC domain 160 392 IPR002182 GO:0043531
Glsi08g2319 645 PRINTS Disease resistance protein signature 173 188 - -
Glsi08g2319 645 PRINTS Disease resistance protein signature 339 353 - -
Glsi08g2319 645 PRINTS Disease resistance protein signature 246 260 - -
Glsi08g2319 645 MobiDBLite consensus disorder prediction 599 645 - -
Glsi08g2319 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 406 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2319 Glsi-ChrGlsi08 18781747 18788323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2319 174 409 WRKY Transcription Factor Family AT5G45050 27.273 3.95e-10 61.2