Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2293 ATGGATCGTCCAAGTGGATCCCCCTCCCAAAGCCAATCAAATTCCACAGGGAACTGCATCCCCGACGACCGCTCCCACGGCGACGAACCACCCACCGACACCCTGATTAATCCAGAGCCAAAGAAACGCAGAGGCAGGCCTTTTGGTTCGAAGAACAAGAAGTCTATGCCACCACCCCCTGTGATCCCCCAACCCGACCAGCAAGCGCTCGTGCCCGTCGTGATCGAAATCTCACCCGGCGCCAACGTGATGGAGTCTCTGGTCCAGTTCGCCCGCCGATGGCAAGGGTGCCTCACAGTGCTAAGTGGGTCCGGGTTAGTCTCCGACGTGACGATTCGCAACCCGTGTTATCCCCATAATGACGTCGTCCTCCCTGGACCCTGCAATATACTTTCTCTTTCAGGCACCTTTCTTCCTCCATCAATGGGGGCTCCATTGTTATCATCTTCAAGAAACTCGTCTTCTTGGTCAGCTTGTTCTATTTTCCTTGCAACTGGGTATCAATGCCAAACGTGGGGCGGAGTGGTCGTCGGAAAATTTGTAGCGGCGAGTTCGGTGGTGGTGCTAGCCGCCGTGTCTAAGAATCCCGAATTTCACAAACTAACGACTTGTGGAAATAATGTCATGCCAGGACCTATGCTTTCTTTGCTTAACTAA 657 0.5342 MDRPSGSPSQSQSNSTGNCIPDDRSHGDEPPTDTLINPEPKKRRGRPFGSKNKKSMPPPPVIPQPDQQALVPVVIEISPGANVMESLVQFARRWQGCLTVLSGSGLVSDVTIRNPCYPHNDVVLPGPCNILSLSGTFLPPSMGAPLLSSSRNSSSWSACSIFLATGYQCQTWGGVVVGKFVAASSVVVLAAVSKNPEFHKLTTCGNNVMPGPMLSLLN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2293 218 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g2293 218 MobiDBLite consensus disorder prediction 22 45 - -
Glsi08g2293 218 ProSiteProfiles PPC domain profile profile. 67 218 IPR005175 -
Glsi08g2293 218 CDD DUF296 72 190 IPR005175 -
Glsi08g2293 218 MobiDBLite consensus disorder prediction 1 65 - -
Glsi08g2293 218 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 201 - -
Glsi08g2293 218 Gene3D - 72 207 - -
Glsi08g2293 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 202 IPR014476 GO:0003680
Glsi08g2293 218 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 192 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2293 Glsi-ChrGlsi08 18270207 18270863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2293 37 198 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 42.331 4.11e-22 89.4