Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2281 ATGGGTTCCTCTATCTTTCCCCTTCTTGTATCATCATTTCTTCTTTGCACGTTCTTGCAGCAGCCAGCTGTTCATGCCAGTAAAAAGCCTTACGTTGTTTACCTGGGATCACATTCTCATGGCCCAAACCCATCCTCTGCTGATATGGATTCTGCCACAAATTCCCATCATGATTTGCTGGGCTCTGTCCTGGGAAGCCATGAGAAGGCCAAAGAAGCTATCTTTTACTCTTATAACAGACATATCAACGGGTTTGCTGCATTACTTGAAGAGGAAGAAGCAGCAGAGATTAAGAAAAAGCCAAATGTGGTGTCTGTGTTCTTGAGTAAAATGCATACGCTGCACACGACCAGGTCATGGGAATTTTTGGGACAAGAAAGAAATGGAAAAGTTAAAGGAAACTCTGCTTGGACGAAGGCAAGATTTGGTCAAAATACCATAATCGGTGTCATTGATACTGGTGTTTGGCCTGAATCCAAGAGCTTCAACGACATGGGATACGGCCCCACCCCATCAAAGTGGCGAGGTGGTGGGCGTGACCATTGCCAGCTTTACAATTTGCCTGGCTCCAATAAAACTCTCTGCAACAGGAAGCTACTTGCAGCAAGAATCTTCCACAAAGGTTATGAGGCGGGAGTTGGCAAGATTGATCCACTACATAATAATAGTGCACGGGATATTGCAGGGCATGGTACCCATACTATGTCAACTGCCGGAGGAAATTTTGTTAGAGGTGCAAGTGTCCTTAATAACGGTAATGGAACTGCTAAGGGAGGGTCCCCTAGAGCTCGTCTTGCAGCCTACAAAGTTTGCTGGAGTCCTGAAGGAGAAGGCTGCTATGATTCAGATCTCTTATCTGCTTTTGATCAAGCCATAAGTGATGGTGTTGACGTGCTCTCAGTTTCAATCGGTGGGTATCAACACTATCCTGAAGATTTGTTAACAGATGGGACCTCCATAGGGGCCTTCCACGCAGTTTCCAAAGGTATAGTAGTAGTTTGCTCTGCAGGCAATGAAGGACCAGAACTTCGAACTGTGAAAAATGTGGCACCATGGACCTTCACTATTGCTGCTAGCTCTATAGACAGGGACTTCAACAATAATATTACTTTTGGTAACGGGCAACGCATAAAGGGAACCAGTCTTTCCACAGCTGGCTTGACTGGAAAGGCATTCTCTTTGATCAGCGGTGGTGATGCTAGGCTTCCTAATGCGATATTTGGAGATGCTCAACAATGCAAGGCTGGAACACTTGATCCTAAGAAAGTAAATGGGAAGATAGTGATATGCCAACGAGGCAGGAGTCTAAGACCAGTTGAAAAGGGCCAGGAAGCCAAACGCGCAGGCGCAGCGGGAATGATTTTTGACAATGATGCGAAAACTACAATTACCGCAGACGCTCACGTGTTAGGTACTTCCACGCACAATGGTTCAGGTGGTTATCACAATTACTACGGCAATACCACGAACCCTCTTGCGTTCTTGGATGATGCAAAAACATTTATAGGAATAAAGCCAGCTCCAATTGTGACTACATTCTCATCTAGGGGACCCAATAACATTCAGCCAGCCATTCTCAAGCCTGACGTAACTGCACCGGGTCTGGACATACTTGCTGCTTGGTCATTTGGGGCAAGTCCTACTAATCTACAATCAGATAAGCGTCGATTTCTATTTAATGTAATGTCAGGAACTTCTATGGCATGCCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAAACACGCCATCCTAAATGGAGTCCAGCAGCTATCAAATCAGCAATCATGACTACTGCAACCACAAGAGATAACACCCATGGACCAATTCTGGATGGAATCACTGAGAAAATAGCAACTCCATTTGCTTATGGTTCAGGACATGTTCAACCTAACAATGCAATAGACCCTGGACTTGTTTATGATCTAAAGCCTTCTGATTACTTAAACTACTTGTGTGGCACATTTGAGTATGCTGCTCCAGAGATTGCTCACATTATGGAGGCAAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTGACTTTGGAAATCATAATGGGAATGCATCCGGGAGAATTTATTTCCTGTTTGGTAGAGATATCAACTACCTATGATTTGCCATTGAAGAATTTGTTGGATCCACGACTTCCTCTTCCCACTGAACCACTTGTTGAGGAGGTGATGTTGATTTCAAAATTAGCATTTGCTTGCTTGAGCGAAAATCCACGTTCTCGGCCAACAATGGAACAAGTATCTATGGAGCTTGAGATGCCAAAATATCATTTGGCGGATAAGTTTGCCACCATTACAATCAGAGAACTCATGAAAATTGAACTTGTCAAGTAA 2346 0.4416 MGSSIFPLLVSSFLLCTFLQQPAVHASKKPYVVYLGSHSHGPNPSSADMDSATNSHHDLLGSVLGSHEKAKEAIFYSYNRHINGFAALLEEEEAAEIKKKPNVVSVFLSKMHTLHTTRSWEFLGQERNGKVKGNSAWTKARFGQNTIIGVIDTGVWPESKSFNDMGYGPTPSKWRGGGRDHCQLYNLPGSNKTLCNRKLLAARIFHKGYEAGVGKIDPLHNNSARDIAGHGTHTMSTAGGNFVRGASVLNNGNGTAKGGSPRARLAAYKVCWSPEGEGCYDSDLLSAFDQAISDGVDVLSVSIGGYQHYPEDLLTDGTSIGAFHAVSKGIVVVCSAGNEGPELRTVKNVAPWTFTIAASSIDRDFNNNITFGNGQRIKGTSLSTAGLTGKAFSLISGGDARLPNAIFGDAQQCKAGTLDPKKVNGKIVICQRGRSLRPVEKGQEAKRAGAAGMIFDNDAKTTITADAHVLGTSTHNGSGGYHNYYGNTTNPLAFLDDAKTFIGIKPAPIVTTFSSRGPNNIQPAILKPDVTAPGLDILAAWSFGASPTNLQSDKRRFLFNVMSGTSMACPHVAGIAGLLKTRHPKWSPAAIKSAIMTTATTRDNTHGPILDGITEKIATPFAYGSGHVQPNNAIDPGLVYDLKPSDYLNYLCGTFEYAAPEIAHIMEANEKCDVYSFGVLTLEIIMGMHPGEFISCLVEISTTYDLPLKNLLDPRLPLPTEPLVEEVMLISKLAFACLSENPRSRPTMEQVSMELEMPKYHLADKFATITIRELMKIELVK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2281 781 CDD Peptidases_S8_3 112 600 IPR034197 -
Glsi08g2281 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 672 IPR045051 -
Glsi08g2281 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 115 IPR037045 -
Glsi08g2281 781 CDD PA_subtilisin_like 368 495 - -
Glsi08g2281 781 ProSiteProfiles Serine proteases, subtilase domain profile. 119 634 - -
Glsi08g2281 781 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Glsi08g2281 781 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Glsi08g2281 781 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Glsi08g2281 781 Pfam Peptidase inhibitor I9 31 114 IPR010259 -
Glsi08g2281 781 Pfam Protein kinase domain 634 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2281 781 ProSiteProfiles Protein kinase domain profile. 470 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2281 781 SUPERFAMILY PA domain 420 485 IPR046450 -
Glsi08g2281 781 Pfam Subtilase family 143 604 IPR000209 GO:0006508|GO:0008236
Glsi08g2281 781 Gene3D - 362 502 - -
Glsi08g2281 781 Pfam PA domain 412 496 IPR003137 -
Glsi08g2281 781 FunFam Subtilisin-like protease SBT1.5 145 373 - -
Glsi08g2281 781 SUPERFAMILY Protein kinase-like (PK-like) 634 762 IPR011009 -
Glsi08g2281 781 SUPERFAMILY Subtilisin-like 114 638 IPR036852 GO:0004252|GO:0006508
Glsi08g2281 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Glsi08g2281 781 Gene3D Peptidase S8/S53 domain 146 647 IPR036852 GO:0004252|GO:0006508
Glsi08g2281 781 FunFam Subtilisin-like protease SBT5.3 19 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2281 Glsi-ChrGlsi08 17985847 17997210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2281 31 716 Subtilisin-like Serine Gene Family AT2G04160 50.649 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2281 Peptidase_S8 2.4e-46 No_clan