Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2273 ATGACCTCATTTGCAGGAACCTTTGGATACGCTGCTCCAGAGATTGCTTACATTATGGAGGCAAATGAGAAGTGTGATGTTTACAGCTTTGGAGTACTGACTTTGGAAATCATAATGGGAACGCATCCGGGAGAATTTATTTTTTCTTTGGCAGAGACATCAACTGCCTATGATTTGCCATTGAAGAATTTGTTGGACCCACGACTTCCTCTTCCCACTGAACCACTTGTTGAGGAGGTGATGTTGATTGCAAAATTAGCATTTTCTTGCTTGAGTGAAAATCCACGTTCTCGCCCAACCATGGAACAAGTATCTATGGAGTTCGTGATGCCAAATTATCATTTAGCGGATAAGTTTGCCACCATCACAATCTCACAACTCATGAAAATTGAACTTGCCAAGTAA 405 0.4123 MTSFAGTFGYAAPEIAYIMEANEKCDVYSFGVLTLEIIMGTHPGEFIFSLAETSTAYDLPLKNLLDPRLPLPTEPLVEEVMLIAKLAFSCLSENPRSRPTMEQVSMEFVMPNYHLADKFATITISQLMKIELAK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2273 134 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Glsi08g2273 134 Pfam Protein kinase domain 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2273 134 SUPERFAMILY Protein kinase-like (PK-like) 1 106 IPR011009 -
Glsi08g2273 134 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Glsi08g2273 134 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2273 Glsi-ChrGlsi08 17654847 17655368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2273 1 104 Receptor kinase-like Gene Family AT5G65700 40.708 3.15e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2273 Pkinase 6.2e-09 CL0016