Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2267 ATGACCTCATTTGCTGGCACCTTTGGGTATGCTGCTCCAGAAATAGCTTACATGATGGAAGCAAATGAGAAATGTGATGTTTATAGCTTTGCGGTATTGACTTTAGAAATCATAATGGGAAAGCATCCCGGAGAGCTTATTTCTTCTTTGACAGAGACTCCAACAACCTATGATTTACCATTAAAAGATGTGTTAGACCAACGGCTTCCTCAACCTACAAGCCCAATTGTTGAAGAGGTGATGCTGATTGCAAAAATAGCATTTTCTTGCTTGAATGAAAGTCCGCGTTCTCGGCCAACCATGGAACAAGTAACTATGGAGCTTGTGATGCCAAAATCTCCTTTAGGGGATAAGTTTTCCACCATCACAATTGGACAACTCATGAAAGACTTAACTTCTTAA 402 0.403 MTSFAGTFGYAAPEIAYMMEANEKCDVYSFAVLTLEIIMGKHPGELISSLTETPTTYDLPLKDVLDQRLPQPTSPIVEEVMLIAKIAFSCLNESPRSRPTMEQVTMELVMPKSPLGDKFSTITIGQLMKDLTS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2267 133 Pfam Protein tyrosine and serine/threonine kinase 9 108 IPR001245 GO:0004672|GO:0006468
Glsi08g2267 133 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2267 133 PANTHER LEUCINE RICH REPEAT KINASE 2 1 119 - -
Glsi08g2267 133 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Glsi08g2267 133 SUPERFAMILY Protein kinase-like (PK-like) 1 110 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2267 Glsi-ChrGlsi08 17516379 17516902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2267 1 117 Receptor kinase-like Gene Family AT1G75820 36.508 1.65e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2267 PK_Tyr_Ser-Thr 1.2e-08 CL0016