Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2266 ATGGTGAGAGGTCCGTACTATGACCAAAATGGACTGAAGAGAGGTGCGTGGAGTAAGGAAGAAGATGAAAGGTTAAGAGCTTATGTTGAAAGATATGGTCATTCCAATTGGCGTCAACTCCCCAAATTTGCAGGTTTATCAAGGTGTAGAAAAAGTTGCAGAATTCGCTGGCTTAATTACCTGAAGCCAAATATTAAACATGGGAATTACACCCACGAAGAAGAACAAATAATCATCAAAATGAATAAACAGCATGGAAATAAAAGAACAGACAATGAAATCAAGAACCATGGGCATAGCAGTCTAAAGAAGCGCATAGAATGCAATGAGGATGGAAAAATGAAATCTGAGTTCAAAATGAGCCCTAATGATACTTCTGAAGGAGAAATTACGACCCAGCATAGAGAATCTGAAATCCCAATAACTAGTGCTGGTGGTGATCCCTCCAATGTTCCAGAAAATTTGCTGCCCATGTACGCAGAAACATCCTACAATAATGAAATTGAGGACTTCACAGTAGAATCCAGCGCTATTGCACCATGGGAAATATTTGAAACATTCAGCAATTTCTGGACTGAACCATTTATGGTAGAAAATACACGAAGTCAGGATAACTGTATTCCCAATCCCATCGATGCTGCAAATGAATTAGACATGGACCAATATGTTTCATATTTGTGGGATAATACAAAGTTGTGCCAGGTGATGCAAGAATTGGCAAAAGATCCTAAATAA 735 0.3864 MVRGPYYDQNGLKRGAWSKEEDERLRAYVERYGHSNWRQLPKFAGLSRCRKSCRIRWLNYLKPNIKHGNYTHEEEQIIIKMNKQHGNKRTDNEIKNHGHSSLKKRIECNEDGKMKSEFKMSPNDTSEGEITTQHRESEIPITSAGGDPSNVPENLLPMYAETSYNNEIEDFTVESSAIAPWEIFETFSNFWTEPFMVENTRSQDNCIPNPIDAANELDMDQYVSYLWDNTKLCQVMQELAKDPK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2266 244 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Glsi08g2266 244 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 172 - -
Glsi08g2266 244 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi08g2266 244 CDD SANT 16 61 IPR001005 -
Glsi08g2266 244 SUPERFAMILY Homeodomain-like 11 97 IPR009057 -
Glsi08g2266 244 Gene3D - 14 66 - -
Glsi08g2266 244 MobiDBLite consensus disorder prediction 115 134 - -
Glsi08g2266 244 FunFam Transcription factor RAX3 7 67 - -
Glsi08g2266 244 SMART sant 66 104 IPR001005 -
Glsi08g2266 244 SMART sant 13 63 IPR001005 -
Glsi08g2266 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2266 Glsi-ChrGlsi08 17487293 17488993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2266 1 109 MYB Transcription Factor Family AT2G31180 53.782 7.20e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi08g2266 Myb_DNA-binding 2.3e-14 CL0123