Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2263 ATGGAGGCAAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTAACTTTGGAAATCATAATGGAAATGCATCCGAGAGAATTTATTTCTTCTTTGGCAGAGACATCAATTACCTATGATTTACCGTTGAAGAATTTGTTGGACCCACGACTTCCTCTTCCCACTGAACCACTTGTTGAGGAGGTGTTGTTGATTGCAAAATTAGCATTTTCTTGCTTGAGGGAAAATCCATGTTCTCGCCCAACCATGGAACAAGTATCTATGGAGCTCGTGATGCCAAATTATCGTTTAGGGGATAAGTTTGCCACCATCCAATCGGACAACTCATGA 330 0.4061 MEANEKCDVYSFGVLTLEIIMEMHPREFISSLAETSITYDLPLKNLLDPRLPLPTEPLVEEVLLIAKLAFSCLRENPCSRPTMEQVSMELVMPNYRLGDKFATIQSDNS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2263 109 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Glsi08g2263 109 SUPERFAMILY Protein kinase-like (PK-like) 3 94 IPR011009 -
Glsi08g2263 109 PANTHER LEUCINE RICH REPEAT KINASE 2 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2263 Glsi-ChrGlsi08 17416768 17417097 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2263 1 101 Receptor kinase-like Gene Family AT3G28040 34.862 6.33e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2263 None None None