Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2261 ATGGAAGCAAATGAGAAATGTGATGTTTATAGCTTCGGGGTATTGACTTTAGAAATCATAATGGGAAAGCATCCAGGAGAGTTTATTTCTTCTTTGACAGAGACTCCAACAACCTATGATTTGCCATTAAAATACATGTTGGACCAGCGGCTTCCTCAACCCACAAGCCTAGTTGTAGAAGAGGTGATGCTGATTGCAAAAATAGCATTTTCTTGCTTGAATGAAAGTCCACGTTCTCGGCCGACCATGGAACAAGTAACTATGGAGCATGTGATGTCAAAATCTCCTTTAGCGGATAAGTTTGCCATCGTCACAATTGGACAACTCCTGAAAGACTTAACTTCTTAA 348 0.4023 MEANEKCDVYSFGVLTLEIIMGKHPGEFISSLTETPTTYDLPLKYMLDQRLPQPTSLVVEEVMLIAKIAFSCLNESPRSRPTMEQVTMEHVMSKSPLADKFAIVTIGQLLKDLTS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2261 115 Pfam Protein tyrosine and serine/threonine kinase 3 87 IPR001245 GO:0004672|GO:0006468
Glsi08g2261 115 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
Glsi08g2261 115 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Glsi08g2261 115 PANTHER LEUCINE RICH REPEAT KINASE 2 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2261 Glsi-ChrGlsi08 17350229 17350576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2261 5 86 Receptor kinase-like Gene Family AT1G07650 43.011 1.42e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2261 PK_Tyr_Ser-Thr 8.8e-08 CL0016