Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2259 ATGCGGAGTGGTGTTTGGCCTGAGTCGAAGAGCTTCAGCGACAAAGGATACGGCCCTATCCCAGCAAAGTGGCGTGGGGGTGGGATATGTGAGATTAATAATTTGCCTGGCTCCAACCAAACTCTCTGCAACAGGAAGCTAATTGGAGCAAGAATATTCCACAAAGGCTACGAGGCACACGTGGGCAAGATTCCCCCAGCGCATCAGAGCGCACGTGACATTGTAGGACACGGCACGCACACTCTCTCAACTTCCGGTGGCAATTTTGTTAGAGGTGCAAGTGTCCTTAATAACGGTAACGGCACAGCTAAAGGAGGGTCCCCTAGAGCTCGCGTCGCAGCCTACAAGGCTTGCTGGTCTGCAACCGATGCAGGAGGGTGCTTTGACGCAGATATGCTCTCTGCTTTTGAACAAGCCATAATTGATGGGGTTGATGTGCTCTCGGTTTCTGTGGGAGGGAATCAACACTATCCTGAAGATTTGCTTACTGATGGGATTTCCATAGGGGCCTTCCATGCTGTTTCCAAAGGTATAGTGGTAGTTTGCTCTGCGGGTAATGAAGGGCCAGGCCCTGGAACTGTGAAAAATGGGGCTCCATGGATCTTCACTATTGCTGCTAGCTCAATAGACAGAGACTTCAACAATAATATTACTCTTGGTAACAGGCTGCGCATAAAGATTAGGAGTCAACTTTGTAACCCTGGAACACTTGATCCTAACAAAGTAAGGGGAAAAATACTGATCTGCCAACGAGGTAGGAGCCTAAGACCACTTGACAAGGGCCAGCAAGCTTTGCTTGCAGGTGCAGTGGGAATGTTCTTGGAAAATGATGGGAAAAGTGGAGAGACAGTTACTGCTGATCCTCATGTTTTACCTACTTCTGGTCTTGCCCAAGATAAAAGCAATACGACGGACCAAGGCAAAGGCAATACCTACTACAACAATTCAAAGAACCCTATTGCATTCATGGATAAAGCAAAGACATTTCTAGGAATAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGGCCCAATGCCATTCAACCAGAACTCCTCAAGCCTGATGTAACTGCCCCTGGTCTAAACATTCTTGCTGCTTACACACTAGGTGCAAGTCCTAGTAATATAGCTTCAGATAAACGTCGGTTTCCATTCAATGTATTGTCAGGAACCTCTATGGCATGCCCTCATGTTGCTGGTATAGTTGGTCTTCTCAAAACACGCTATCCTAAATGGAGTCCTGCAGCTATCAAATCAGCAATCATGACCACTGCAACCATACTAGACAACACCAACAATTTGATTCGGGACGGTGCTAATGAACAACCAGCAACTCCATTTGCTTATGGTTCAGGACATGTTCGCCCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAAAGCCTTCTGATTACTTGAACTTCTTGTGTGGTTCTGGATACGAGGAAGGATTAGTTGCAGCTTTCAATTATAACAAGCCATACAAATGTCCTAAGTCTTACAAGATACAAGACTTCAACTACCCTTCAATCACACTGTCTCATCTGAGTGCAAGCCCTATAACTGTTACTCGGACAGTAACAAATGTTGGACCTCCCAGCACATACTCAGTGAAAATCCAAGCACCTAGAGGAGTTAAGGTTCTTGTTCAGCCAAAAACCTTGAGTTTTCAAAAGACTGGTGAAAAGAAGATATTTAAAGTTATTTTTCAGGCAACGGGTTTGCCTCAGAGTGAGGATTTTCCGTTTGGAGAGTTGTCATGGACAGATGGGAAGCACAGAGTTAGGAGTCCTCTTGTAGTGTTGCGCGCTGAGACATGA 1830 0.4579 MRSGVWPESKSFSDKGYGPIPAKWRGGGICEINNLPGSNQTLCNRKLIGARIFHKGYEAHVGKIPPAHQSARDIVGHGTHTLSTSGGNFVRGASVLNNGNGTAKGGSPRARVAAYKACWSATDAGGCFDADMLSAFEQAIIDGVDVLSVSVGGNQHYPEDLLTDGISIGAFHAVSKGIVVVCSAGNEGPGPGTVKNGAPWIFTIAASSIDRDFNNNITLGNRLRIKIRSQLCNPGTLDPNKVRGKILICQRGRSLRPLDKGQQALLAGAVGMFLENDGKSGETVTADPHVLPTSGLAQDKSNTTDQGKGNTYYNNSKNPIAFMDKAKTFLGIKPAPVMASFSSRGPNAIQPELLKPDVTAPGLNILAAYTLGASPSNIASDKRRFPFNVLSGTSMACPHVAGIVGLLKTRYPKWSPAAIKSAIMTTATILDNTNNLIRDGANEQPATPFAYGSGHVRPDLAIDPGLVYDLKPSDYLNFLCGSGYEEGLVAAFNYNKPYKCPKSYKIQDFNYPSITLSHLSASPITVTRTVTNVGPPSTYSVKIQAPRGVKVLVQPKTLSFQKTGEKKIFKVIFQATGLPQSEDFPFGELSWTDGKHRVRSPLVVLRAET 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2259 609 Gene3D - 229 330 - -
Glsi08g2259 609 Gene3D - 210 226 - -
Glsi08g2259 609 Gene3D Peptidase S8/S53 domain 331 475 IPR036852 GO:0004252|GO:0006508
Glsi08g2259 609 Gene3D Peptidase S8/S53 domain 3 209 IPR036852 GO:0004252|GO:0006508
Glsi08g2259 609 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 604 IPR045051 -
Glsi08g2259 609 SUPERFAMILY Subtilisin-like 43 466 IPR036852 GO:0004252|GO:0006508
Glsi08g2259 609 PRINTS Subtilisin serine protease family (S8) signature 73 86 IPR015500 -
Glsi08g2259 609 PRINTS Subtilisin serine protease family (S8) signature 391 407 IPR015500 -
Glsi08g2259 609 Pfam PA domain 237 300 IPR003137 -
Glsi08g2259 609 CDD Peptidases_S8_3 3 428 IPR034197 -
Glsi08g2259 609 ProSitePatterns Serine proteases, subtilase family, serine active site. 392 402 IPR023828 -
Glsi08g2259 609 FunFam Subtilisin-like protease SBT1.5 1 219 - -
Glsi08g2259 609 FunFam Subtilisin-like protease SBT1.5 479 607 - -
Glsi08g2259 609 ProSiteProfiles Serine proteases, subtilase domain profile. 1 462 - -
Glsi08g2259 609 CDD PA_subtilisin_like 229 322 - -
Glsi08g2259 609 Gene3D - 479 606 - -
Glsi08g2259 609 Pfam Subtilase family 64 454 IPR000209 GO:0006508|GO:0008236
Glsi08g2259 609 MobiDBLite consensus disorder prediction 289 309 - -
Glsi08g2259 609 MobiDBLite consensus disorder prediction 295 309 - -
Glsi08g2259 609 Pfam Fibronectin type-III domain 508 604 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2259 Glsi-ChrGlsi08 17312634 17323172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2259 1 604 Subtilisin-like Serine Gene Family AT2G04160 50.473 0.0 625