Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2258 ATGACCTCATTTGTAGGAACCTTTGGATATGCTGCTCCAGAGATTGCTTTCGTTATGGAAGCAAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTGACTTTGGAAATCTTAATGGGAATACATCCAGGAGAGCTCATCGCTTCTTTGACAGAGACACCAACAACTTATGATTTTCTATTGAAGGATGTGTTGGACCAGCGACTTGCTCAACCGAAGAAACCAATTGTTGAGGAGGTGATGTTGATTGCAAAATTAGCATTTACTTGCCTGAATAAAAATCCACGATCTCGTCCAACCATGGAACAAGTATCTAATGAGCTTGTGATGCCAAAATTACCTTCAGCACCCCATTTTGCCACCATCACCCTTAGACAACTTATAGAAGGTTAA 393 0.4046 MTSFVGTFGYAAPEIAFVMEANEKCDVYSFGVLTLEILMGIHPGELIASLTETPTTYDFLLKDVLDQRLAQPKKPIVEEVMLIAKLAFTCLNKNPRSRPTMEQVSNELVMPKLPSAPHFATITLRQLIEG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2258 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 114 - -
Glsi08g2258 130 SUPERFAMILY Protein kinase-like (PK-like) 1 113 IPR011009 -
Glsi08g2258 130 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Glsi08g2258 130 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2258 130 Pfam Protein kinase domain 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2258 Glsi-ChrGlsi08 17288906 17289397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2258 2 119 Receptor kinase-like Gene Family AT3G55550 35.385 6.59e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2258 Pkinase 1.1e-10 CL0016