Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2257 ATGGAGTCTGCCACTAATTCCCATTGTGATTTGCTGGGCTCTGTCCTGGGAAGCACTGAGAAGGCCAAAGACGCTATCTTTTACTCTTATAATAGACACATTAATGGCTTTGCTGCATTACTTGAAGAAGAAGAAGCAGCAGAGATCAAAAAAAAGGCAAATGTGGTGTCGGTGTTCGAGAACAAAATGCATAAACTGCATACTACAAGGTCATGGGAATTTCTGGGACTTGAAAGAAATGGAAGAATTGGAGTAAACTCTGCTTGGAAGAAGGGAAGTTTTGGTCAAAATACAATCATCGGTAACATTGATACAGGTTACGAGGCACACGTGGGCAAGATTCTCCCGGCGCAGCAGAGCGCACGTGACATTATAGGACACGGCACGCACACTCTCTCAACTTCCGGTGGCAATTTTGTTAGAGGCGCAAGTGTCCTTAATAATGGTAACGGCACAGCTAAAGGAGGGTCCCCTAGAGCTCGCGTCGCAGCCTACAAGGCTTGCTGGTCTGCAACCGATGCAGGAGGATGCATTGACGCAGATCTGCTCTGTGCTTTTGACCAAGCCATAAGTGATGGAGTTGATGTGCTCTCGGTTTCTGTGGGAGGGAATCAACACTATGCCGAAGATTTGTTAACAGATGGGATTTCCATAGGGGCCTTCCATGCCGTAGCCAATGGTATAGTGGTAGTCTGCTCTGCAGGTAATGAAGGACCAGACCCTGGAACTGTGAAAAACGTGGCTCCATGGACCTTCACTGTTGCTGCCAGCTCAATAGACAGAGACTTCAACAATAATATTACTCTTGGTAACAGGCTGCGCATAAAGGGAACCAGTCTTTCCACAGGATTGCCATCTCAGAGGTTCTTTTCTTTGATCCGTGCGGGTGATGCTAAGCTTCCTAACGCAACAGTTCAGGATGCTCAACTTTGCAAGCCTAGAACACTTGATCCAAACAAAGTAAGGGGAAAAATACTGATCTGCCAACGAGGTAGGAGCTTAAGACCACTTGACAAGGGGCAGCAAGCTTTGCTTGCAGGTGCAGTGGGAATGTTTTTGGAAAATGATGGGAAAAGTGGGAATACAATTACTGCTGATGCTCATGTTTTAGCTACTTCTGGTTATACCAATAAATCAGCTGGGAGCGAAGGCAATACCTACTACAACAATTCAAAGAACCCTATTGCATTCATGGATAAAGCAAAGACATTTCTAGGAATAAGGCCAGCACCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATGCCATTCAACCAAAACTCCTCAAGCCTGACATAACCGCACCTGGTCTGAACATCCTTGCTGCTTACACACTAGGCGCGAGTCCTAGTAACATAGCTTCAGACAAACGTCGGTTTCCGTTCAATGTATTATCAGGAACCTCTATGGCATGCCCTCATGTCGCTGGTATAGTTGGTCTTCTCAAAACATGCTATCCTAAATGGAGTCCTGCTGCCATCAAATCAGCAATTATGACCACTGGTATGACCTTGAGATACCATTTTTTGCTTTGCTAG 1539 0.4581 MESATNSHCDLLGSVLGSTEKAKDAIFYSYNRHINGFAALLEEEEAAEIKKKANVVSVFENKMHKLHTTRSWEFLGLERNGRIGVNSAWKKGSFGQNTIIGNIDTGYEAHVGKILPAQQSARDIIGHGTHTLSTSGGNFVRGASVLNNGNGTAKGGSPRARVAAYKACWSATDAGGCIDADLLCAFDQAISDGVDVLSVSVGGNQHYAEDLLTDGISIGAFHAVANGIVVVCSAGNEGPDPGTVKNVAPWTFTVAASSIDRDFNNNITLGNRLRIKGTSLSTGLPSQRFFSLIRAGDAKLPNATVQDAQLCKPRTLDPNKVRGKILICQRGRSLRPLDKGQQALLAGAVGMFLENDGKSGNTITADAHVLATSGYTNKSAGSEGNTYYNNSKNPIAFMDKAKTFLGIRPAPVMASFSSRGPNAIQPKLLKPDITAPGLNILAAYTLGASPSNIASDKRRFPFNVLSGTSMACPHVAGIVGLLKTCYPKWSPAAIKSAIMTTGMTLRYHFLLC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2257 512 CDD PA_subtilisin_like 266 397 - -
Glsi08g2257 512 Pfam Peptidase inhibitor I9 3 67 IPR010259 -
Glsi08g2257 512 FunFam subtilisin-like protease SBT1.5 260 405 - -
Glsi08g2257 512 ProSitePatterns Serine proteases, subtilase family, serine active site. 467 477 IPR023828 -
Glsi08g2257 512 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 67 IPR037045 -
Glsi08g2257 512 SUPERFAMILY Subtilisin-like 67 504 IPR036852 GO:0004252|GO:0006508
Glsi08g2257 512 FunFam Subtilisin-like protease SBT5.3 1 67 - -
Glsi08g2257 512 Gene3D Peptidase S8/S53 domain 105 505 IPR036852 GO:0004252|GO:0006508
Glsi08g2257 512 ProSiteProfiles Serine proteases, subtilase domain profile. 71 512 - -
Glsi08g2257 512 Pfam Subtilase family 116 502 IPR000209 GO:0006508|GO:0008236
Glsi08g2257 512 PRINTS Subtilisin serine protease family (S8) signature 466 482 IPR015500 -
Glsi08g2257 512 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Glsi08g2257 512 PRINTS Subtilisin serine protease family (S8) signature 123 136 IPR015500 -
Glsi08g2257 512 Gene3D - 260 405 - -
Glsi08g2257 512 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 107 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2257 Glsi-ChrGlsi08 17271330 17276252 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2257 1 504 Subtilisin-like Serine Gene Family AT5G59810 52.545 0.0 535