Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2251 ATGCAAGCAAATGAGAAATGTGATGTGTATAGCTCCGGAGTTCTGACTTTGGAAATCCTGATGGGAAAGCATCCAGGAGAGCTTATTTCTTCTCTGACAGAAACCTCGACAGTGTATGATTTGCTATTGAAAGATTTGTTGGACGCACGGCTTCCTCAACCCACAAACTCAGTTGTTGAGGAAGTGATGTTGATCGCAAAAATAGCATTTGCTTGCTTGAATGAAAATCCACATTCTCGCCCAACCATGGAGCAAGTATCTCTTCAGTTTGCGAGGCCAAAACCTCATTTTGCTGACCATCCTGGAAAGTTTATTTCTTCTCTAACAGAGACCCCAACCGTCAATGATTTGCTATTGAAAGATGTGTTGGACTCACGGCTTCCTCAACCCATAAACTCAGTCGTTAAGGAAGTGATGTTGATTGCAAAAATAGCATTTACTTGCTTGAATGAAAATCCATGTTCCCGTCCAACCATGGAACAAGTATCTCTTGAGCTTGCAAGGCCAAAACCTCATATTGTAGGCCAGTTTGCCACCGTCACACTTGGGCAACTCATGAAATATTGA 567 0.425 MQANEKCDVYSSGVLTLEILMGKHPGELISSLTETSTVYDLLLKDLLDARLPQPTNSVVEEVMLIAKIAFACLNENPHSRPTMEQVSLQFARPKPHFADHPGKFISSLTETPTVNDLLLKDVLDSRLPQPINSVVKEVMLIAKIAFTCLNENPCSRPTMEQVSLELARPKPHIVGQFATVTLGQLMKY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2251 188 PANTHER LEUCINE RICH REPEAT KINASE 2 99 171 - -
Glsi08g2251 188 SUPERFAMILY Protein kinase-like (PK-like) 3 91 IPR011009 -
Glsi08g2251 188 Pfam Protein tyrosine and serine/threonine kinase 3 87 IPR001245 GO:0004672|GO:0006468
Glsi08g2251 188 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Glsi08g2251 188 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2251 Glsi-ChrGlsi08 17163200 17168283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2251 5 92 Receptor kinase-like Gene Family AT1G16150 32.632 6.42e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2251 PK_Tyr_Ser-Thr 1.2e-05 CL0016