Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2249 ATGCATAATATCACTGGTCTCATATTTTTACTTGTGGCAGAGATTGGTTTTACTATGCAAGCGAATGAAAAATGTGATGTTTACAGCTTTGGAGTTCTGACTTTAGAAATTCTCATGGGAAAGCATCCAGGAGAGCTTATTTTTTCTTTGAGAGAGATCCCAACAACCTATTACTTACCATTGAAGGATATGCTGGACCAGCGGCTTCCTCAACCCGAAAACCCAATTATTGAGGAAGTGATGTTGATAGCAAAAATAGCATTTGCTTGCTTGAATGAAAATTCACATTCTCGGCCAACCATGAAACAAGAATCTTTGGAGCTTGCCAGGCCAAAACCTCAATTGGTAGACCAGTTTGCCACCATCACAATTGGGCAACTCATGAAATATTGA 393 0.3944 MHNITGLIFLLVAEIGFTMQANEKCDVYSFGVLTLEILMGKHPGELIFSLREIPTTYYLPLKDMLDQRLPQPENPIIEEVMLIAKIAFACLNENSHSRPTMKQESLELARPKPQLVDQFATITIGQLMKY 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2249 130 SUPERFAMILY Protein kinase-like (PK-like) 16 103 IPR011009 -
Glsi08g2249 130 Pfam Protein tyrosine and serine/threonine kinase 14 103 IPR001245 GO:0004672|GO:0006468
Glsi08g2249 130 PANTHER LEUCINE RICH REPEAT KINASE 2 12 114 - -
Glsi08g2249 130 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2249 Glsi-ChrGlsi08 17145515 17145907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2249 23 110 Receptor kinase-like Gene Family AT1G16150 35.789 4.66e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2249 PK_Tyr_Ser-Thr 9.2e-07 CL0016