Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2248 ATGAAGCACATGCTCGCTTGCTTCTTTCTTGGTTTTGCTGCTGACTGCTCCCACTGTATATGGAGTGGACCATATTGTAAGAAGCAGCGCCGGATGGGCCTGTCAGGGAATTATAGCACATGGGCTGCTGGAGAAACATTCAAAGTTGGCGATAATGTGGGGGTAAGTAGCGCCATGGTTTTCAGACTTTGGGAGTTTGGTTTTGCTTTGAGGCAAACATATGCAGGCAAGTGTCTTGACACTACTGATTCATGGACGCAGATAGAGATTGCTTTCACTTTGCAAGTGAATGAGAAATGTGATGTGTATAACTTCGGAGTTCTGACTTTGGAAATCCTTATGGGAAAGCATCCAGGAGAGTTTATTTCTTCTCTGACAGAGACCGAAACAGTTTATGATTTGCTTTTGAAAGATGTGATGGACTCATGGCTTCCTCAACCCACAAACTCATTTGCTGAGGGAGTGATGTTGAGGCCAAAACCTAATTTTGTAGACGCATTTGCCACCATCTTACTTGGGCAACTCATGGAATATTGA 537 0.4395 MKHMLACFFLGFAADCSHCIWSGPYCKKQRRMGLSGNYSTWAAGETFKVGDNVGVSSAMVFRLWEFGFALRQTYAGKCLDTTDSWTQIEIAFTLQVNEKCDVYNFGVLTLEILMGKHPGEFISSLTETETVYDLLLKDVMDSWLPQPTNSFAEGVMLRPKPNFVDAFATILLGQLMEY 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2248 178 PANTHER LEUCINE RICH REPEAT KINASE 2 77 153 - -
Glsi08g2248 178 Pfam Protein tyrosine and serine/threonine kinase 52 122 IPR001245 GO:0004672|GO:0006468
Glsi08g2248 178 SUPERFAMILY Protein kinase-like (PK-like) 51 138 IPR011009 -
Glsi08g2248 178 Gene3D Transferase(Phosphotransferase) domain 1 50 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2248 Glsi-ChrGlsi08 17126027 17133776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2248 51 156 Receptor kinase-like Gene Family AT5G65710 31.304 5.11e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2248 PK_Tyr_Ser-Thr 1.6e-05 CL0016