Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2245 ATGAGGCTTTCTTCGTCGAGGTTTAGTCAAGTGGTTCAAGAAGCCTGTAATGCTGCAGGCGAGAAAAAATGTTTGAATTCTGAACTATGGCATGCATGTGCTGGACCTCTGGTGTTTCTGCCTCTTGTTGGAAGTCGCGTTGTCTACTTTCTCCACGGTCCCAATGAGCAGGTTGCTGCTTCAACCAACAAGGAAGTAGATGCACATATTCCCAATTACCCTAACTTACCACCTCGGCTTATTTGTGAGCTTCACAATATGACAATGCATCCAGATGCAGAAACAGATGGAGTATATGCTCAAATGACTCTGCAACCTCTAAGTCCACAAGAGCAAAAGGATATCTATCTACTGCCTACAGACTTGGGTACTACCAGCAAACAACCAACCAACTACTGTAAAACATTAACTGCAAGTGATACCAGCACTCATGGAGGATTCTCTGTTCCTCAAAGAGCAGCTGAAAAAGTCTTTCCTCCTCTTATAGGTCGTATTGACCTAGTGGCTTTTGTCTATATTTGA 522 0.4349 MRLSSSRFSQVVQEACNAAGEKKCLNSELWHACAGPLVFLPLVGSRVVYFLHGPNEQVAASTNKEVDAHIPNYPNLPPRLICELHNMTMHPDAETDGVYAQMTLQPLSPQEQKDIYLLPTDLGTTSKQPTNYCKTLTASDTSTHGGFSVPQRAAEKVFPPLIGRIDLVAFVYI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2245 173 SUPERFAMILY DNA-binding pseudobarrel domain 123 161 IPR015300 -
Glsi08g2245 173 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 161 IPR044835 GO:0003677|GO:0006355|GO:0009725
Glsi08g2245 173 Gene3D - 130 167 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2245 Glsi-ChrGlsi08 17100311 17102292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2245 1 161 B3 DNA Binding Superfamily AT1G30330 75.926 1.03e-74 238