Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2243 ATGGGAACGCATCCAGGAGAGTTTATTTCTTCTCTGACAGAGACCGAAACAGTTTATGATTTGCTTTTGAAAGATGTGATGGACTCATGGCTTCCTCAACCCACAAACTCATTTGCTGAGGGAGTGATGTTGAGGCCAAAACCTAATTTTGTAGACGCACATACGCTGGCAAGTGTCTTGATGATTGAGTCACGGATGCAGATAGAGATTGCTTTTACTATGCAAGCGAATGAGAAATGTGATGTGTATAGCTTCGGAGTTCTAACTTTAGAAATTCTTATGGGAAAGCATCCAGGAGAATTTATTTCTTCTCTGACAGAGACCCCAACAGTCTATGATTTGCTATTGAAAGATGTGTTGGACTCACGGCTTCCTCAACCCACAAACTCAGTTGTTGAGGAAGTGTTGTTGATTGCAAAAATAGCATTTGCTTGCTTGAATGAAAATCCAATTTCCCGCCCAACCATGGAGAAAGTATCTCTTGAGCTTGCGAGGCCAAATCATTTGGTAGACCAGTTTTCCACCATCACACTTGGGCAACTCATGAAATATTGA 555 0.4162 MGTHPGEFISSLTETETVYDLLLKDVMDSWLPQPTNSFAEGVMLRPKPNFVDAHTLASVLMIESRMQIEIAFTMQANEKCDVYSFGVLTLEILMGKHPGEFISSLTETPTVYDLLLKDVLDSRLPQPTNSVVEEVLLIAKIAFACLNENPISRPTMEKVSLELARPNHLVDQFSTITLGQLMKY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2243 184 PANTHER LEUCINE RICH REPEAT KINASE 2 67 167 - -
Glsi08g2243 184 Gene3D Transferase(Phosphotransferase) domain 1 33 174 - -
Glsi08g2243 184 Pfam Protein tyrosine and serine/threonine kinase 66 161 IPR001245 GO:0004672|GO:0006468
Glsi08g2243 184 SUPERFAMILY Protein kinase-like (PK-like) 69 163 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2243 Glsi-ChrGlsi08 17066087 17071893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2243 78 165 Receptor kinase-like Gene Family AT1G16150 34.737 2.58e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2243 PK_Tyr_Ser-Thr 6.1e-08 CL0016