Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2237 ATGCAAGTGAATGAGAAATGTGATGTTTATAGCTTCGGAGTTCTAACTTTGGAAATCCTTATGGGAAAGCATCCTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAATGGCCTATGATTTGCCATTGAAGGATTTGTTAGACCAACGGCTTCCTCAGCCCACAGACACAATTGTTAAGGAAGTGATGTTGATGGCAAAAATAGCATTTGATTGCTTGAATCAAAATCCACGTTCTCATACAACCATGGAACAGGTATCTCTGGAGCTTGTGAGGCCAAAATCTTCAGTATCTTTTGTCTCAGTGGGGCAGTATCTCTATGAGAGGCTAAGAATCTCAGTAGATAGCCTACTCGTTGCAGGGGAAGCCACAAGTACAAGCTATTCAGGATCTGTGCATGGTGCATTTTCTACTGGAGTGCTGTCTGGTGAAGATTGGTACGTCCTGAAGTGGTATGGAGAGCTAGACTTGTTCCAGCCCGTTATGGTAGAGGAGGCTTCAGTACCTATCCCTCTTCAGATCTCTCGTTTTTAA 534 0.4326 MQVNEKCDVYSFGVLTLEILMGKHPGELISSLTEIPMAYDLPLKDLLDQRLPQPTDTIVKEVMLMAKIAFDCLNQNPRSHTTMEQVSLELVRPKSSVSFVSVGQYLYERLRISVDSLLVAGEATSTSYSGSVHGAFSTGVLSGEDWYVLKWYGELDLFQPVMVEEASVPIPLQISRF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2237 177 Gene3D Transferase(Phosphotransferase) domain 1 1 92 - -
Glsi08g2237 177 PANTHER LEUCINE RICH REPEAT KINASE 2 1 95 - -
Glsi08g2237 177 SUPERFAMILY Protein kinase-like (PK-like) 3 90 IPR011009 -
Glsi08g2237 177 Pfam Flavin containing amine oxidoreductase 54 140 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2237 Glsi-ChrGlsi08 16963264 16964942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2237 2 96 Receptor kinase-like Gene Family AT1G16150 32.353 1.97e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2237 Amino_oxidase 2.1e-06 CL0063