Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2236 ATGCAAGTGAATGAGAAATATGATGTTTATAGCTTCGGAGTTCTAACTTTGGAAATCCTTATGGGAAAGCATCCTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAACGGCCTATGATTTGCCATTGAAGGAGGTGTTAGACCAACGGCTTCCTCGGCCCCTAGACACAGTTGTTGAGGAAGTGATGATGATTGCAAAAATAGCAATGGATTGCTTAAATCAAAATCCACGTTCTCGTCCAACCATGGAACAGGGACTCAGATGGGGTCTGCTTACCGGATCTACTAAATCCTGCTCAGCCCGTTCAGCCATGGATGCCGAAGCAAAAGCAATGGCAGAGGCGTTGATCTTAGCAAGAAACCTCCACATGAATCGTGAAACAGATGAGATTGCTTTTACTATGCAAGTGAATGAAAAATGTGATGTTTATAGCTTCGGAGTTCTAACTTTGGAAATCCTTATGGGAAAGCATCCTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAACAGCCTATGATTTGCCATTGAAGGATGTGTTAGACCAACGGCTTCCTCAACCCACAGACACAATTGTTGAGGAAGTGATGTTGATTGCAAAAATAGGATTTGATTGCTTGAATCAAAATCCACGTTCTCGTCCAACCATGGAACAGGTATCTCTGGAGCTAGTGAGGCCAAAATGTTATTCAGAAGATCAATTTGCCACCATCACTGTAGGACAACTGATTATGAAAGATTAA 744 0.4207 MQVNEKYDVYSFGVLTLEILMGKHPGELISSLTEIPTAYDLPLKEVLDQRLPRPLDTVVEEVMMIAKIAMDCLNQNPRSRPTMEQGLRWGLLTGSTKSCSARSAMDAEAKAMAEALILARNLHMNRETDEIAFTMQVNEKCDVYSFGVLTLEILMGKHPGELISSLTEIPTAYDLPLKDVLDQRLPQPTDTIVEEVMLIAKIGFDCLNQNPRSRPTMEQVSLELVRPKCYSEDQFATITVGQLIMKD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2236 247 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2236 247 PANTHER LEUCINE RICH REPEAT KINASE 2 130 228 - -
Glsi08g2236 247 SUPERFAMILY Protein kinase-like (PK-like) 130 225 IPR011009 -
Glsi08g2236 247 Gene3D Transferase(Phosphotransferase) domain 1 102 226 - -
Glsi08g2236 247 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Glsi08g2236 247 Pfam Protein tyrosine and serine/threonine kinase 130 222 IPR001245 GO:0004672|GO:0006468
Glsi08g2236 247 Pfam Protein tyrosine and serine/threonine kinase 3 85 IPR001245 GO:0004672|GO:0006468
Glsi08g2236 247 SUPERFAMILY Protein kinase-like (PK-like) 3 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2236 Glsi-ChrGlsi08 16935800 16946955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2236 2 85 Receptor kinase-like Gene Family AT1G79680 34.783 2.67e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2236 PK_Tyr_Ser-Thr 1.7e-07 CL0016