Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2235 ATGCAAGTGAATGAGAAATGTGATGTTTATAGCTTCGGGGTTCTAACTTTGGAAATCTTTATGGGAAAGCACCCTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAACAGCCTATGATTTGCCATTGAAGGAGGTGTTAGACCAACAGCTTCCTCAGCCCGCAGACACGGTTGTTGAGGAAGTGATGTTGATTGCAAAAATAGCAATGGATTGCTTGAATCAAAATCCACGTTCTCGTCCAACCATGAAACAGGTTGGATCTGTTTTGGTTGTTATTTATCAGATTGGCAACGTTTGTATTGATTTTAGAGGGCCTATAGTACCTTTACTAGCAACTAAAGATATAGATTACTATAATAGCAATGTTAGAGGATTTTTGTTGGTTACTTACCTGATTGGTTTACTAGTAGCTGCTAGCTCTGGACTTATTTATCAGAATGCATGCAAGTAA 453 0.3863 MQVNEKCDVYSFGVLTLEIFMGKHPGELISSLTEIPTAYDLPLKEVLDQQLPQPADTVVEEVMLIAKIAMDCLNQNPRSRPTMKQVGSVLVVIYQIGNVCIDFRGPIVPLLATKDIDYYNSNVRGFLLVTYLIGLLVAASSGLIYQNACK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2235 150 PANTHER LEUCINE RICH REPEAT KINASE 2 1 91 - -
Glsi08g2235 150 SUPERFAMILY Protein kinase-like (PK-like) 2 96 IPR011009 -
Glsi08g2235 150 Pfam Protein tyrosine and serine/threonine kinase 3 88 IPR001245 GO:0004672|GO:0006468
Glsi08g2235 150 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2235 Glsi-ChrGlsi08 16923600 16926288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2235 1 93 Receptor kinase-like Gene Family AT3G28040 37.000 2.60e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2235 PK_Tyr_Ser-Thr 3.7e-08 CL0016