Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2234 ATGACTTCATTTGCTGGCACCTTTGGGTATGCTGCTCCAGAGATTGCTTTTACTATGCAAGTGGATGAGAAATGTGATGTTTATAGCTTCGGAGTTCTAACTTTGGAAATCCTTATGGGAAAGCATCCTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAACAGCCTATGATTTGCTATTGAAGGATGTGTTAGACCAACGGCTTCCTCAGCCCGCAGACACAGTTGTTGAGGAAGTGATGTTGATTGCAAAAATAGCATTTGATTGCTTGAATCAAAATCCACGTTCTCGTCCAACCATGGAACAGGTATCTCTGGAGCTCGTGAGGCCAAAATGTTATTCAGTAGACCAATTTGCCACCATCACAATAGGGAAACTAATTGTGAAAGATTGA 396 0.4167 MTSFAGTFGYAAPEIAFTMQVDEKCDVYSFGVLTLEILMGKHPGELISSLTEIPTAYDLLLKDVLDQRLPQPADTVVEEVMLIAKIAFDCLNQNPRSRPTMEQVSLELVRPKCYSVDQFATITIGKLIVKD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2234 131 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2234 131 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2234 131 SUPERFAMILY Protein kinase-like (PK-like) 1 105 IPR011009 -
Glsi08g2234 131 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Glsi08g2234 131 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2234 Glsi-ChrGlsi08 16910912 16911804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2234 2 110 Receptor kinase-like Gene Family AT1G16150 36.207 2.29e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2234 Pkinase 5.1e-11 CL0016