Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2230 ATGGGAAAGCATCTTGGAGAACTTATTTCTTCTTTGACAGAGATCCCAATAGCCTATGATTTGCCGTTGAAGAATGTGTTAGACCAACGGCTTCCTCAACCGACAGACACAGTTGTTGAGGAAGTGATGTTGATTGCAAAAATAACATTTGATTGCTTGAATCAAAATCCACATTCTCATCCAACCATGGAACAAGTATCTCTGGAGCTCGTGAGGCCAAAATAGATTGCTTATACCATGCAAGCGAATGAGAAATGTGATGTTTATAGCTTCGGAGTTCTAACTTTGGAAATCCTTATGGGAAAGCATCCTGGAGAACTTATTTCTTCTTTGACAGAGATCTCAACAGCCTATGATTTGCCACTGGAGGATGTGTTAGACCAACGGATTCCTCAGCCCACAGACACAGTTGTTGAGGAAGTGATGTTGATTGCGAAAATAGCATTTGATTGCTTGAATCAAAATCCACATTCTCGTCCAACCATGGAACAAGTATCTCTGGAGCTTGTGAGGCCAAAATCTTATTCACTAGACCAATTTGGTACCATCACAATTGGACAACTGATTATGAAAGATTGA 579 0.4041 MGKHLGELISSLTEIPIAYDLPLKNVLDQRLPQPTDTVVEEVMLIAKITFDCLNQNPHSHPTMEQVSLELVRPKXIAYTMQANEKCDVYSFGVLTLEILMGKHPGELISSLTEISTAYDLPLEDVLDQRIPQPTDTVVEEVMLIAKIAFDCLNQNPHSRPTMEQVSLELVRPKSYSLDQFGTITIGQLIMKD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2230 192 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2230 192 Pfam Protein tyrosine and serine/threonine kinase 80 167 IPR001245 GO:0004672|GO:0006468
Glsi08g2230 192 SUPERFAMILY Protein kinase-like (PK-like) 78 166 IPR011009 -
Glsi08g2230 192 Gene3D Transferase(Phosphotransferase) domain 1 67 171 - -
Glsi08g2230 192 PANTHER LEUCINE RICH REPEAT KINASE 2 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2230 Glsi-ChrGlsi08 16856738 16860915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2230 84 176 Receptor kinase-like Gene Family AT1G16150 35.000 1.28e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi08g2230 PK_Tyr_Ser-Thr 4.2e-07 CL0016