Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2226 ATGCAAGATTATTTTAGCTCTAGATGTTTTGGCCATGTGACTTACGCACTTCTCACCCTTGTGGAAGAGCAGTTCATATATGATCTACCAGACAAACTTGGAAAGTGCATTAAATCAGAGGCCTACACAGATGTAGTCAGGTTTTGGAGAGGGAAGTTCGCTTGTCGTATTGGGACAAAGTTAAGCAGACTTTTTTATGGTTGTGCCTCTTACAGCAAAAGGAAATGGGAAATTTTGTTCTCCATTTTTCGCCGTTATATTTTATTTTCGCCGTCCAAGCAGGGTATTCACGTGTCACCAGATCAGGCACAACTGCTTGCAATGCTTGTGCAAATTCTTGGAGCAGAACGATGTATTGAAGTTGGTGTTTATACCGTATGTCCTTCATTTTTACACTGGGTTTCTTCAGATTACATTGTACTTATTGCCTCATTTTATCTCACACTGTACATGGGTTAG 459 0.4031 MQDYFSSRCFGHVTYALLTLVEEQFIYDLPDKLGKCIKSEAYTDVVRFWRGKFACRIGTKLSRLFYGCASYSKRKWEILFSIFRRYILFSPSKQGIHVSPDQAQLLAMLVQILGAERCIEVGVYTVCPSFLHWVSSDYIVLIASFYLTLYMG 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2226 152 Gene3D Vaccinia Virus protein VP39 81 129 IPR029063 -
Glsi08g2226 152 Pfam O-methyltransferase 94 125 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2226 Glsi-ChrGlsi08 16662314 16663464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2226 52 125 Monolignol Biosynthesis Gene Families AT3G61990 45.946 5.72e-12 60.1