Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2212 ATGAAGAATTCTCAGAGAACCGGAGTAAGGCAGTACCTCAAGTCCGATCATCCGCGCCTCCGGTGGACACCGGAACTCCATGAACACTTTGTTGAAGTTGTTCAAAGTCTGGGTGGAAAACACAAGGCTACTCCAAAGCGAATTTTGCAGATGATGCGTGTGAGAGGATTGAAGATCTCTCACATTAAGAGCCATCTTCAGATGTATAGAAACACGAAGGGGCATGCCATCATCGCATCAGTTGATGAATTGCTCAAAGGAAAAGCTCACGCTAATGATCTTCAAATCTGCTCCATTTGCTCCCCCCAAAGATCGCGAGTACTAGAAGCATCAAAATATGACAGCAACAGTATCAAACGAGAATTTCATCTGTTAGACAACAAGGGGCTTTCCCAAACAAGTGAAGAAACAGATTATGATCTAAATCAGGAGCCCTATACAACTAGTGCAGCATGCTTAGTCAGTGATATGTCAAATGAAGAAGAAAATTACGGAGGGACAATTCCATTTGGTGATAAGCTCTCACTTTCTTTTGATCAAACTACTAATCTATTTCCAATGAAGATGGTGCATAGTGGCCAAGAATATCAGAGAATATTGAGTTTGTCTTCAAACTCAGCAGATGATTATGATCATTTTGTTTCTTCACCAAACTCAGCATATGGTCATGATCATGTTGATCATAATTCTAGTTCAACACAATCTCTTGGAAGGAAAAATTGCATAAACTTAGATCTAACAATTTGA 747 0.4003 MKNSQRTGVRQYLKSDHPRLRWTPELHEHFVEVVQSLGGKHKATPKRILQMMRVRGLKISHIKSHLQMYRNTKGHAIIASVDELLKGKAHANDLQICSICSPQRSRVLEASKYDSNSIKREFHLLDNKGLSQTSEETDYDLNQEPYTTSAACLVSDMSNEEENYGGTIPFGDKLSLSFDQTTNLFPMKMVHSGQEYQRILSLSSNSADDYDHFVSSPNSAYGHDHVDHNSSSTQSLGRKNCINLDLTI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2212 248 Gene3D - 17 74 - -
Glsi08g2212 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Glsi08g2212 248 FunFam Two-component response regulator 13 76 - -
Glsi08g2212 248 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Glsi08g2212 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Glsi08g2212 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 119 IPR046955 GO:0003700
Glsi08g2212 248 SUPERFAMILY Homeodomain-like 17 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2212 Glsi-ChrGlsi08 16500028 16505858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2212 9 73 G2-like Transcription Factor Family AT2G42660 63.077 7.77e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi08g2212 Myb_DNA-binding 1.2e-07 CL0123