Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2209 ATGCTTAATTTTCTCATCGCAAGATTATCTTCATCACTGCCATGCAGGAGGAGGACCCAACTGGGTTTTCTCCATCACAGTGCTTCCCACATTTTCAGATCTTTTGCTTCAGTTGTAAAATTATCTGAATCAAATCAACCAAAACAAAAACAAGAAGGAAATGAATCGTTTACAGTTTCTTATCTCATGAACTCATGTGGCTTGTCCCCCAAAGTAGCTATTGAAGTATCCAAAAGGGTTCGTTTGAAAGGCCCAGAGAATCCCGACTCGGTGCTTAATATTTTCAGGAGCTACGGATTCTCAGAAACCCAGATATCCAAATTAGTGAAAAAGTTTCCACCATTGCTTTTGGCAAAGCCTGAGAAGACCCTTTTGCCCAAGCTAAGGTTTTTACTGTCTATAGGGTTTTCATCCTCTGAACTCCCCGAACTCCTCACTTCTAACTCTAGAATCCTAGCCAGCAGCTTAAAGAGACGTATAGTCCCCAGTTATGAGGTCCTTAAGAGTGTGCTTGATGACGATGAGAAAGTCTGTATAACTATAAAACGCTCACGATGGTATTTTCTCTTCCACGGTGTAGAGAATTTGGTCACAAACATAAAGGTTTTGAGAGAACATGGAGTGCCTCAATCTTCTATCTCTCTACTGTTAACTAATTTCATAAGCGTAGCATTTATGAGTAATGCAAAGCTTGTTGAATCTATCAAGTTTGCTAAGGAAATAGGAATGGAACCCTTAAAGGCTATATTCATCCACGTAATTTTTGTCGCAGCAATGACAAAGAAATCAACATGGGAATCAAAGATGGAAATCTTTGAGAGGTGCGGCTGGTCCAGGGATGTCACTCTTTTAGTATTCAAGAAGTATCCGTATTGCATGCTCTTGTCAGAGGAGAAAATCACAAACTCAATGAAGTTTCTTGTGGATGAAATGGGTTTGGCATTGGAAGATATAGCAAAAAACCCAACACTTCTTGGCTATAGCTTGAAGCAGAGAATTATTCCTAGATGCTCGGTAATTAAAATTCTGAAAATGAAGGGTTTGATCAATAAGGATATATCCTTATCTCTCATTGTCAGATTAAGTGAGAAAAATTTTCTGGAGAAATTTATGGTCAGATTTCAGGAAAGTATTCCTGAGCTATTGACCATCTATGGAAGTCCATTAGGACCTTTACCTGAAGTTCAGTCCTAG 1194 0.3903 MLNFLIARLSSSLPCRRRTQLGFLHHSASHIFRSFASVVKLSESNQPKQKQEGNESFTVSYLMNSCGLSPKVAIEVSKRVRLKGPENPDSVLNIFRSYGFSETQISKLVKKFPPLLLAKPEKTLLPKLRFLLSIGFSSSELPELLTSNSRILASSLKRRIVPSYEVLKSVLDDDEKVCITIKRSRWYFLFHGVENLVTNIKVLREHGVPQSSISLLLTNFISVAFMSNAKLVESIKFAKEIGMEPLKAIFIHVIFVAAMTKKSTWESKMEIFERCGWSRDVTLLVFKKYPYCMLLSEEKITNSMKFLVDEMGLALEDIAKNPTLLGYSLKQRIIPRCSVIKILKMKGLINKDISLSLIVRLSEKNFLEKFMVRFQESIPELLTIYGSPLGPLPEVQS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2209 397 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 SMART mt_12 29 69 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 Pfam mTERF 92 308 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 Pfam mTERF 262 367 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 Gene3D Transcription termination factor 3, mitochondrial 172 377 IPR038538 -
Glsi08g2209 397 PANTHER CGI-12 PROTEIN-RELATED 55 372 IPR003690 GO:0003690|GO:0006355
Glsi08g2209 397 FunFam Mitochondrial transcription termination factor-like 156 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2209 Glsi-ChrGlsi08 16471111 16472304 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g2209 mTERF 1.4e-32 No_clan