Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2208 ATGCTTAATTTTCTCATTGCAAGATTATCTGCATCACTGCCATCTAGGAGGAGGACCCAACTGGGTTTTCTCCATCACAATGCTTCCCACATTATCAAATCGTTTGTTTCAGCTGTAGAATTATCTGAACCGAATCAACCACAGCAAAAAGAACAAGGAAATGAATCATTTACAGTTTCTTATCTCAAGAACTCATGTGGCTTGTCCCCCAAAGTAGCTATTGAAGTATCCAAAAGGGTTCATTTGAAAGATCCAGAGAATCCCGACTCGGTCCTTAATCTTTTAAGGAGCTACAAATTCTCAGAAACCCAGATATCCAAAATAGTGAAAAAGTGTCCACGAGTGCTATTAACAAAGTCCGAAAAGACCCTTTTGCCCAAGCTAAGGTTTTTGCAGTCTCTAGGGTTTTCATGCTCTGAACTCCCAGAACACCTCCTTTTTAAGACTAACTTTAGATGCATAGACTGGAGCTTAAAGACACGTATAATTCCCGGTTATGAGGCTCTTAAGAGTGTGCTTGATGATGACGAGAAAGTATATAAATCTCTAAAACGCTCAGGATGGAGTTTTCTCCATTATGATATAACAAATATAGTCCCAAACATAAAGTTTTTGAGAGAATTTGGAGTGCCTCAATCTTCTGTCTCTCTACTGGTAACTAATTATGCAAGTGTAGCATTCATGACTCATGCAAAGTTTGTTGAACATGTCAAGTTTTCTAAGGAATCAGGAATAGAACCTTTTAAGACTACGTTCATCCAGGCAATTTATGTTTCGGCAATGATGAAAAAGTCAACCTGGGAGTCAAAGCTAGATATCTTTGAGAGGTGCGGCTGGTCCAGGGATGTCTCTCTTTCAGTATTCAGGAAGTTTCCATTTTGTATGGTGCTGTCAGAGGAAAAAATCACAAACTCAGTCAAGTTTCTGGTAGATGAAATGGGTTTGGCATTGGAAGATATAGCTAAAAACCCATCACTTCTTGGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGCTCAGTAGTTAAAATTTTGAAAATGAAGGGTTTGATCAATAATGATATGTCCTTACCCTACATTGTCATATTAAGTGAGAAAAAGTTTCTGGAGAAATTCGTGGTCAGATTTCAGGAAAGTGTTCCTAAGCTATTGAATATCTATGAAGGTCAATTACAATTTTGA 1182 0.3799 MLNFLIARLSASLPSRRRTQLGFLHHNASHIIKSFVSAVELSEPNQPQQKEQGNESFTVSYLKNSCGLSPKVAIEVSKRVHLKDPENPDSVLNLLRSYKFSETQISKIVKKCPRVLLTKSEKTLLPKLRFLQSLGFSCSELPEHLLFKTNFRCIDWSLKTRIIPGYEALKSVLDDDEKVYKSLKRSGWSFLHYDITNIVPNIKFLREFGVPQSSVSLLVTNYASVAFMTHAKFVEHVKFSKESGIEPFKTTFIQAIYVSAMMKKSTWESKLDIFERCGWSRDVSLSVFRKFPFCMVLSEEKITNSVKFLVDEMGLALEDIAKNPSLLGYSLKQRIIPRCSVVKILKMKGLINNDMSLPYIVILSEKKFLEKFVVRFQESVPKLLNIYEGQLQF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2208 393 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 SMART mt_12 184 211 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 PANTHER CGI-12 PROTEIN-RELATED 55 375 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 Gene3D Transcription termination factor 3, mitochondrial 143 379 IPR038538 -
Glsi08g2208 393 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 Pfam mTERF 92 246 IPR003690 GO:0003690|GO:0006355
Glsi08g2208 393 FunFam Mitochondrial transcription termination factor-like 158 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2208 Glsi-ChrGlsi08 16464273 16465454 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g2208 mTERF 1.9e-16 No_clan