Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2207 ATGAATTCATGTGGCTTGTCCCCCAAGGTAGCTATTGAAGTATCCAAAAGGGCTAAATTGAAAGACCCAGGGAATCCCGACTCGGTGCGGTTGGTCCAGGGATGTCACTCTTTCAGTATTCAGGAAGTACCCATTTGCATGCTGCTGTCAGAGGAAAAAAATCACAAACTCTTTCTTGTGGACGAAATGGGTTTGGCAACGGAAGATATAGCTAAATGCCCACCATTTCTTGGCTATAGCTTGAAACAGAGGATTATTCCTAGATGCTCAGTAGTTAAAATTTTGAAAATGAAGGGCTTGATCAATAATGATATGTCCTTATCTTCCACTTTCGTATTAAGTGAGAAGAAGTTTCTGGAGAAATTTGTGGTCAGATTTCAGGAAGGTATTCCTGAGCTATTGAGCATCTATAGAAGTTAA 420 0.4048 MNSCGLSPKVAIEVSKRAKLKDPGNPDSVRLVQGCHSFSIQEVPICMLLSEEKNHKLFLVDEMGLATEDIAKCPPFLGYSLKQRIIPRCSVVKILKMKGLINNDMSLSSTFVLSEKKFLEKFVVRFQEGIPELLSIYRS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2207 139 Pfam mTERF 40 119 IPR003690 GO:0003690|GO:0006355
Glsi08g2207 139 PANTHER CGI-12 PROTEIN-RELATED 43 124 IPR003690 GO:0003690|GO:0006355
Glsi08g2207 139 Gene3D Transcription termination factor 3, mitochondrial 36 128 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2207 Glsi-ChrGlsi08 16460222 16461160 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g2207 mTERF 4.9e-12 No_clan