Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2181 ATGCAAATGAAGAAGGCCCGCGAAGGGTTGTGGTGGGTATACCTGCGCCTATCTATGCTCATCGAGTCTCTGTCAGTTCAAGAAGAAGGCCGTCTCTTGCTTCTCTGGTCGCTAAAGGTAGAAGATCAGGGAGGCTGGCTTAGATCAATAGAAGGTTCTTTGAATGAGGAATTGTCGAAGAAATTTTTGGGTATGAAACTATGGGTTTTAATTGGGATAGGCGTTGGTGCATTTATAGTGCTGATTCTTTTTATACTATCTATATGGACTATGTTTTGGAGAAAGTCTAGGAGGTCTCTGGACAAGTCCTCTCTATCCCAAATACCAAATGTCTCCAAAGACATCAAGGTTGACAAGATTGGAGTGCAGAGTTCTCATAGTCACCCGGAAAGTGTATTTATTCCTTTTAATGACAAGGGAGATGATAAGAATTCAGGTAAGGTGTTAGTTCAATCAGGCATGAGCAAATCCAGTGATCCTGACAATATCAGTCAGTGCAGTTCGATATATCATCACGAAAGAGGGTGTAGTACACTGTCAGGGGAAGAGGGGAGCTCTGGGACAGTTAAGAAGCAGTCTAAGTTCTCATATGGAGGGATGGTGACTGCCTCTCCTTTAATTGGCTTGCCAGAAGTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGGGATCTGGAACTTGCAACAAGACGTTTTTCAGAAGAGAATGTGCTTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGATTGATCAATGGAACTGAAGTGGCAGTGAAGAAACTTCTTAATAACTTGGGACAAGCGGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTCGACATAAAAATCTTGTGCGCCTGCTTGGATATTGCATGGAAGGAGTTCACAGGTTGCTGGTGTACGAATATGTGAATAACGGTAACTTAGAACAATGGTTACATGGGGCTATGTGCCAACATGGGATACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACAGCCAAAGCGCTTTCATACTTACATGAAGCAATAGAACCAAAAGTTGTTCACCGGGATATCAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCCAAGGTTTCTGATTTTGGTTTGGCCAAACTCTTGGGTTCAGGAGAAAGTCACATAACGACTAGAGTCATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATACCGGTTTGTTAAATGAGAAGAGTGATATTTACAGCTTTGGTGTTCTACTTCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCTAACGAGGTTAATCTCGTTGAATGGCTCAAGATTATGGTTGGCACGAGAAGAGTTGAGGAAGTTGTGGACCCAAGCCTCGAAGTTAAACCATCAACACGTGCATTGAAGCGTGCCCTTCTGGTTGCACTTAGGTGTGTTGATCCTGATGCTGACAAGAGACCCACAATGGGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCATTCCGAGAGGATCGAAGGAATCGAAAGAGCCGTACTGCCAGCATGGAAATTGAATCCATGAAGGATCCTTCTGGTCAATCCGATGCAGGAAAGGTAGGGAATTCTGAAAGCCATATGCAAGAGACAACTCGAGGGTATGATTGA 1674 0.4421 MQMKKAREGLWWVYLRLSMLIESLSVQEEGRLLLLWSLKVEDQGGWLRSIEGSLNEELSKKFLGMKLWVLIGIGVGAFIVLILFILSIWTMFWRKSRRSLDKSSLSQIPNVSKDIKVDKIGVQSSHSHPESVFIPFNDKGDDKNSGKVLVQSGMSKSSDPDNISQCSSIYHHERGCSTLSGEEGSSGTVKKQSKFSYGGMVTASPLIGLPEVSHLGWGHWFTLRDLELATRRFSEENVLGEGGYGVVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGVHRLLVYEYVNNGNLEQWLHGAMCQHGILTWEARMKVILGTAKALSYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKIMVGTRRVEEVVDPSLEVKPSTRALKRALLVALRCVDPDADKRPTMGQVVRMLEADEYPFREDRRNRKSRTASMEIESMKDPSGQSDAGKVGNSESHMQETTRGYD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2181 557 MobiDBLite consensus disorder prediction 511 557 - -
Glsi08g2181 557 Coils Coil 253 273 - -
Glsi08g2181 557 CDD STKc_IRAK 239 505 - -
Glsi08g2181 557 SMART serkin_6 233 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2181 557 ProSiteProfiles Protein kinase domain profile. 233 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2181 557 Pfam Protein kinase domain 234 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2181 557 Gene3D Transferase(Phosphotransferase) domain 1 309 522 - -
Glsi08g2181 557 FunFam Putative receptor-like serine/threonine-protein kinase 309 519 - -
Glsi08g2181 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Glsi08g2181 557 FunFam Putative receptor-like protein kinase 215 308 - -
Glsi08g2181 557 PANTHER OS01G0323000 PROTEIN 53 529 - -
Glsi08g2181 557 Gene3D Phosphorylase Kinase; domain 1 214 308 - -
Glsi08g2181 557 ProSitePatterns Protein kinases ATP-binding region signature. 239 262 IPR017441 GO:0005524
Glsi08g2181 557 MobiDBLite consensus disorder prediction 538 557 - -
Glsi08g2181 557 SUPERFAMILY Protein kinase-like (PK-like) 217 506 IPR011009 -
Glsi08g2181 557 MobiDBLite consensus disorder prediction 511 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2181 Glsi-ChrGlsi08 16094604 16100132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2181 212 528 Receptor kinase-like Gene Family AT4G02010 46.526 3.46e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi08g2181 Pkinase 5.3e-49 CL0016