Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2179 ATGAGGGACAACCAAACAAGCTTAACTGAGAGCTTAAATGGTTCCATGGATCACTACAATACTCTCTCAAGAGCCTTTGACTTGTCTTGCTCGTCATCTGAAGTGATCTCCCCGTCCATTGATGACCTCAACCACCCAAAGAAGCCAGACTCTGTAGGAATTATCAGTGGGAACCCATCATCCACCCCCAATTCCTCTGTGTCTTGTTCATCTAATGAAGCAGAAGCTGCAGTAACAGAAGAAGACTCAGCCAAAAGCAAAAAAGATAAGCAGCTCAAAGAAGGGCGTGAAGATAATGGAGATGATGACAAGTCTAAGAAAGAGAACAAGCCAAAAAATAAGAAAGAGAAAAAGGCAAGACAGCCACGCTTTGCCTTCTTGACTAAAAGTGAGATCGATCACTTAGAAGATGGATACAGGTGGAGAAAATATGGACAGAAAGCAGTCAAAAACAGTCCTTACCCAAGGAGCTATTACAGATGCACAAGTCAGAAGTGCATTGTGAAGAAAAGGGTGGAGAGGTCATACCAGGACCCATCAATTGTGGTGACAACTTATGAAGGGCAGCACAACCACCACTGTCCGGCAACACTCCGAGGAAATGCCGCTGCGATGTTATCATCCTCGCCTTCCCTTTTTGCTCCCACATCCATAGGGAGGACAAGCTTATTACCCCAAGATCTCCTTGCTCAATTGCTTCCAAGTTATAGCCAAAGTGACCACCAAAATCCCATGTTCCACCAAAACCCTACTACCCACCATCATCCTCTCCAGCAGCAACACCAACAGCAGTTTCAACTCTCTCATGACTATGGCTTGCTGCAAGACCTCCTTCCCTCATCATCATTCCCTAGTAAACAAGAGCCATGA 870 0.454 MRDNQTSLTESLNGSMDHYNTLSRAFDLSCSSSEVISPSIDDLNHPKKPDSVGIISGNPSSTPNSSVSCSSNEAEAAVTEEDSAKSKKDKQLKEGREDNGDDDKSKKENKPKNKKEKKARQPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVVTTYEGQHNHHCPATLRGNAAAMLSSSPSLFAPTSIGRTSLLPQDLLAQLLPSYSQSDHQNPMFHQNPTTHHHPLQQQHQQQFQLSHDYGLLQDLLPSSSFPSKQEP 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2179 289 SMART WRKY_cls 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g2179 289 MobiDBLite consensus disorder prediction 54 77 - -
Glsi08g2179 289 MobiDBLite consensus disorder prediction 36 124 - -
Glsi08g2179 289 SUPERFAMILY WRKY DNA-binding domain 128 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g2179 289 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g2179 289 MobiDBLite consensus disorder prediction 78 110 - -
Glsi08g2179 289 ProSiteProfiles WRKY domain profile. 130 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g2179 289 FunFam WRKY transcription factor 57 121 195 - -
Glsi08g2179 289 Gene3D WRKY domain 120 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g2179 289 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 255 IPR044810 GO:0003700
Glsi08g2179 289 MobiDBLite consensus disorder prediction 238 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2179 Glsi-ChrGlsi08 16077657 16079952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2179 7 289 WRKY Transcription Factor Family AT4G18170 45.548 3.50e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g2179 WRKY 4.5e-25 CL0274