Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2175 ATGTCTACTCCACCACCTACAACAGCTTGTCAAAGATGTGCTGACAGCGGAGTTCTAAGAATTAATACGAATTCAACCCATTTGTTCGGTCCATTTTCAATTCCTGATGTAATTGGCTGTCTCCAAGCTTTAGAGGCCATTAAGATTGCAAGTGTTGTTAACGAACCACTCCCAAGAAGGATGCTTCTCTTTGATGCATTGTCTGCACGGATTCATATTTCTCCTTTGAATTTAAATCTTCTTCCCACTGAATCAAGAATCAGCAGCAAGGAGTACTGCGAAAGAATCCGTAACAAGGAACCCCATGAGCTAATGGATGTGAGACTGGCTCACCATTTCAAGATTGTCTCTTTTGCAATGTCCTTGAACATTCCACTCTCAACTTTGGAGGCTAGATTGCCTAAAATATCATCAACTTTGAAGACACAGGAAGAGGGTGCTTTAAGTGCACACTTGTATGTAGTATACAGAAGAGGAAATGACTCTCAGAGGGATGTTCAGTATCTTCAAAAGATGGGTTTTACTTCTGCCAAGGACATTATTAGGGGTTTGGAATCTTGGGCTAAGGATGTGGATCCAAACTTCCCCTCATATTAG 597 0.4137 MSTPPPTTACQRCADSGVLRINTNSTHLFGPFSIPDVIGCLQALEAIKIASVVNEPLPRRMLLFDALSARIHISPLNLNLLPTESRISSKEYCERIRNKEPHELMDVRLAHHFKIVSFAMSLNIPLSTLEARLPKISSTLKTQEEGALSAHLYVVYRRGNDSQRDVQYLQKMGFTSAKDIIRGLESWAKDVDPNFPSY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2175 198 Gene3D - 85 198 IPR036873 -
Glsi08g2175 198 ProSiteProfiles Rhodanese domain profile. 98 196 IPR001763 -
Glsi08g2175 198 PANTHER FAD-DEPENDENT OXIDOREDUCTASE 82 195 - -
Glsi08g2175 198 FunFam Adenylyltransferase and sulfurtransferase MOCS3 85 198 - -
Glsi08g2175 198 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 78 195 IPR036873 -
Glsi08g2175 198 SMART rhod_4 88 193 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2175 Glsi-ChrGlsi08 16026301 16028265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2175 3 198 Sulfurtransferasese or Rhodanese AT5G55130 50.628 1.43e-69 214