Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2161 ATGGGCATTCCACCACTTTGCGCCAATGGCTGTGGCTTCTATGGCTCTTCTGCAAACGACAACCTCTGCTCCAAGTGTTACCGACATGCTCTCACCAAGAAGATGGCTCTGTTTTCATTACCTGAAGATTCAAAGGGTGAAGAAACCAAGATCGATGATCCTGTTAGTGTTGCTAATAAAGAATCTTGTGCTTCGGACATTCCGGAGAAGAAGAAGAGGTGCAAGAGTTGCAACAGGAAGGTTGGACTAACGGGGTTCGAGTGCCGTTGTGGCGACCTGTTCTGTGGAAGCCATAGATACCCAGAAGAGCATGCATGCACTGTGGACTTCAAGCACATTGGTCGCCAACTTTTGATCCAACAGAACCCTCTCTGCAGGGGTGATAAGTTGGAAGGGAAACTCTAG 405 0.484 MGIPPLCANGCGFYGSSANDNLCSKCYRHALTKKMALFSLPEDSKGEETKIDDPVSVANKESCASDIPEKKKRCKSCNRKVGLTGFECRCGDLFCGSHRYPEEHACTVDFKHIGRQLLIQQNPLCRGDKLEGKL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2161 134 Pfam AN1-like Zinc finger 74 109 IPR000058 GO:0008270
Glsi08g2161 134 Gene3D - 2 61 - -
Glsi08g2161 134 Gene3D - 62 117 IPR035896 -
Glsi08g2161 134 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 131 - -
Glsi08g2161 134 Pfam A20-like zinc finger 6 28 IPR002653 GO:0003677|GO:0008270
Glsi08g2161 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 34 - -
Glsi08g2161 134 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Glsi08g2161 134 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Glsi08g2161 134 ProSiteProfiles Zinc finger AN1-type profile. 68 114 IPR000058 GO:0008270
Glsi08g2161 134 SMART AN1_Zf_4 74 111 IPR000058 GO:0008270
Glsi08g2161 134 SUPERFAMILY AN1-like Zinc finger 60 128 IPR035896 -
Glsi08g2161 134 FunFam Zinc finger AN1-type containing 6 47 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2161 Glsi-ChrGlsi08 15720830 15721234 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2161 6 131 C2H2 Transcription Factor Family AT3G52800 38.312 1.86e-26 95.9