Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2144 ATGACATCTGTAATTGAAAGAGGGGACAGAACGCAGATCTTGGGGGGTGAAAATGAGAGAGTTATCGTTTCTGGGTTGGAGCCTGGTCGCTTTATGATTGTGGTTGGTGGCTGCTTTTGCTGGTGGGTGCGTCTGGTATTGGAATTGGAGGAGAAGTGCATGTGGGATTTCATTTGGATTCTATGTTTTGTGAAGGATTTCGGGAAGAGAATACGCTGGGATTGTGGGCTTGTGATCCGCAGCAGGGGACGTTTTTGGAGACTGTTTTGGTGTCGGCAGAAAATGCAGCAAGATCACAGAAAAAAGAGCTCCACAGAGATGGAATTTTTCTCCGAATATGGTGATGCTAACCGGTACAAAATTCAAGAAGTCATCGGGAAGGGAAGTTATGGCATTGTTTGTTCGGCAATTGACACTCATACCGGTGAAAAAGTGGCAATAAAGAAGATACATGACATATTTGAGCACATATCTGATGCTGCACGTATTCTTCGCGAAATAAAGCTTCTCAGGCTTCTGCGACATCCCGATATAGTTGAAATTAAACATATTATGCTGCCTCCTTCTAGTAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCCGATCTTCACCAGGTCATCAAAGCCAATGATGACTTAACTAAAGAGCACTATCAGTTTTTTCTCTACCAGCTTCTTCGAGCACTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACCTGAAACCAAAGAATATACTGGCCAATGCAAATTGTAAACTCAAAATCTGTGATTTTGGGTTAGCCAGAGTGGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCTCCGGAGCTTTGTGGATCATTTTACTCGAAGTATACTCCAGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTGTTAACAGGAAAACCACTTTTTCCTGGAAAAAATGTTGTCCATCAATTGGATCTGATGACTGATCTGCTTGGGACTCCCTCACTAGATACGATATCCCGGGTGCGTAATGATAAGGCAAGAAGATACCTAACTAGCATGAGGAAAAAGCAACCCGTACAATTTGCACAAAAATTTCCAAATGCAGATCCTTTAGCACTACGATTACTGGAAAGATTGCTCGCTTTTGATCCAAAAGACCGACCAACTGCTGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGTCCAGAGTTGAGAGGGAACCATCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACCAAGGAAGAAGTACGGGAGCTAATCTTCCGTGAGATTCTAGAGTATCATCCGCAACTATTGAAAGACCACATAAATGGAACAGAGAGAACTAATTTTCTATATCCAAGTGCTGTTGATCACTTCAGGAAGCAATTTGCTCATCTTGAGGAAAATAATGGTAAAAATGGCCCAGTTATGCCACTTGAAAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATATGGTACCACCAAAAGAGCAATTAAATATTGCTTCCTGCAAAAGCCGGCATACAGCGGAGGAGTATAATAAGAATCCCAGAGATACAGAAATTCCTGTGCCAAGGTCACTCCAGGGGCAGCAAAGAATTCCACTAGCAAAACCTGGCAAAGTTGTTGGGCCGGTCGTTCCATATGAGTATGCAAGTGTTGTCAAGGATTCTTATGATCCAAGGACATTTATTAGAGGCTCTGTGCCGCCTCCTTCTCAAGCTGTTCCCCCTGCATATTATTACCAAAGATCTAGTCCAGGAAATCAAGAAAGGTCAGCAACAGAAGCTGACAAGGGTGTGCTTTTGCAAGCCAAGCATACCCATTCTGGAGTTCGATCCAAAATGGCACCAGATATAGCCATTAATATTGATACGAACCCTTTTTTTATGACACGGGCAGGAGTGAATGGGATAGAACCAGATGATCGAATAGCTATCGACACGAACTTACTGCAGCCAAAGGCTCAATATGGTGGTATTGGTGCTGCTGCTGCTGGAGCCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGTATGACTAGGATGTTCTAA 2130 0.4258 MTSVIERGDRTQILGGENERVIVSGLEPGRFMIVVGGCFCWWVRLVLELEEKCMWDFIWILCFVKDFGKRIRWDCGLVIRSRGRFWRLFWCRQKMQQDHRKKSSTEMEFFSEYGDANRYKIQEVIGKGSYGIVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVQFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSRVEREPSCQPITKMEFEFERRRVTKEEVRELIFREILEYHPQLLKDHINGTERTNFLYPSAVDHFRKQFAHLEENNGKNGPVMPLERKHVSLPRSTIVHSNMVPPKEQLNIASCKSRHTAEEYNKNPRDTEIPVPRSLQGQQRIPLAKPGKVVGPVVPYEYASVVKDSYDPRTFIRGSVPPPSQAVPPAYYYQRSSPGNQERSATEADKGVLLQAKHTHSGVRSKMAPDIAINIDTNPFFMTRAGVNGIEPDDRIAIDTNLLQPKAQYGGIGAAAAGATAHRKVGPVQYGMTRMF 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2144 709 ProSitePatterns Protein kinases ATP-binding region signature. 125 149 IPR017441 GO:0005524
Glsi08g2144 709 FunFam Mitogen-activated protein kinase 109 212 - -
Glsi08g2144 709 FunFam Mitogen-activated protein kinase 205 433 - -
Glsi08g2144 709 Gene3D Phosphorylase Kinase; domain 1 134 456 - -
Glsi08g2144 709 SUPERFAMILY Protein kinase-like (PK-like) 115 414 IPR011009 -
Glsi08g2144 709 ProSiteProfiles Protein kinase domain profile. 119 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2144 709 SMART serkin_6 119 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g2144 709 MobiDBLite consensus disorder prediction 531 555 - -
Glsi08g2144 709 CDD STKc_TDY_MAPK 118 455 - -
Glsi08g2144 709 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 118 455 - -
Glsi08g2144 709 ProSitePatterns MAP kinase signature. 154 257 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi08g2144 709 Gene3D Transferase(Phosphotransferase) domain 1 205 433 - -
Glsi08g2144 709 Pfam Protein kinase domain 119 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2144 Glsi-ChrGlsi08 15525932 15532414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2144 95 557 MAP Kinase Gene Family AT2G42880 83.871 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi08g2144 Pkinase 2.2e-67 CL0016