Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2124 ATGGTGAGTCCGATAGGAAACATGGGGAACGATGATATGGTTCCGCCGTGGTTGAAACCAATGCTAAAAGCAAACTATTTTGTTCCCTGCTCAATTCATGGGGATTCTAATAAGAGCGAATGCAACATGTTCTGTATGGATTGTACGGGGAACGCTCTCTGCTCTTACTGTCTGATTCATCACAGAGATCACCGAGTCATACAGATAAGGCGGTCCTCGTACCATAACGTGGTTAGAGTCAACGAGATTCAAAGGTACATCGACATTTCCTGTGTCCAAACCTACATTATCAACAGCGCCAAAATCGTATTTCTCAATGAGAGGCCACAGCCAAGACCTGGAAAGGGTGTCACTAATACTTGCGAGATTTGTTGCAGAAGCCTGCTCGACTCATTCAAATTCTGCTCTTTGGGTTGTAAGCTGGGGGCGTTGAAGCGGGGTAACTCACCCCAACTCACATTTGCGCTAAGGGGGAAGAACAAGAATCTGGGTGAATCAGAATCGGACGAATCATCAACTCCCAAGAAGATTCGGAAGACTCGTGTTTTCGACCGCATGATCATAGATGATCCGGCTATTTTTTACAACAACTACGAAGGCAAAGACAGGTCCTCTGTTTCAGAAGAAGACAGCGTCGCCAACATCTCTCCTGCCACACCCCCCATCTACAACCACAGTAATGCCAGGAGAAGAAAAGGCATACCCCACCGTGCTCCATTTTAA 723 0.4661 MVSPIGNMGNDDMVPPWLKPMLKANYFVPCSIHGDSNKSECNMFCMDCTGNALCSYCLIHHRDHRVIQIRRSSYHNVVRVNEIQRYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFKFCSLGCKLGALKRGNSPQLTFALRGKNKNLGESESDESSTPKKIRKTRVFDRMIIDDPAIFYNNYEGKDRSSVSEEDSVANISPATPPIYNHSNARRRKGIPHRAPF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2124 240 Pfam PLATZ transcription factor 70 141 IPR006734 -
Glsi08g2124 240 MobiDBLite consensus disorder prediction 206 240 - -
Glsi08g2124 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 240 - -
Glsi08g2124 240 MobiDBLite consensus disorder prediction 209 223 - -
Glsi08g2124 240 CDD Bbox2 30 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2124 Glsi-ChrGlsi08 14911526 14912482 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi08g2124 PLATZ 7.1e-28 No_clan