Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2102 ATGGATCTTTCTCCTCCCTTCACCATATTAGAAGGCACTCAAGGCAGTTACAACAAAGACAATGCATCGGTCATGGAAGATGAGAAATCAAGTCATTTGAACAATCTCAAACAAATCACTAATGCTAAACCCCCACGCAACCTCTCCGTTATGAGACATAGCATTAGCTCTACCAGGTTGATAGCTGCAGCAGATTTGAGTTTGGATGTGGAGGTTGTTGGGAGTAAGTCGTCGTCTGACGAGAAGGCAGAGTTTCTACCCATATTTCGCTCAGGAAGTTGCGCTGAAAGAGGACCTAAACAGTATATGGAGGATGAACACATCTGTGTAGATAATCTTATTGAACACCTAGGTTCAGCTTCAGATATTCCTTCTCATGGAGCCTTCTATGGGGTGTTTGATGGTCATGGGGGTAACGACGCAGCTGCATATATAAGAAATAACATCCTCAGATTTATAGTTGAGGACCCCCATTTTCCAACTTATTTGGAGAAGGCAATTAAAAGTGCCTTTTTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACCGCACTTGTATTTGGAAGGACCCTGATAATTGCCAATGCTGGGGATTGTCGGGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCACAAACCAAATTGCACGTCAGAAAGGCTAAGGATTGAGAAACTTGGTGGAGTCGTGTATGATGGATACCTGAATGGGCAGCTATCTGTTGCCCGTGCCCTAGGAGACTGGCACATGAAGGGTCCAAAGGGTTCTGCCTGCCCCTTAAGCGCCGAACCAGAGTTGCAGGAGACTCACTTGAGCGAGGATGATGAATTCTTAATTATGGGCTGCGATGGCCTCTGGGATGTAATGAGTAACCAATGTGCTGTGACGATGGCAAGGAAAGAATTGATGCTGCATAATGATCCAGAAAGGTGTTCAAGAGAGCTGGTCAGAGAGGCTCTTAAGCGTAACACTTGTGATAATTTAACAGTTATCGTGGTGTGTTTCTCCCCCGATCCTCCTCCACGGATAGAGACCCCTCCTCGAGTTAGGAGGAGTATTTCAGCGGAAGGGCTCAATTTACTTAAGGGTGTACTGGATTGTAACTCATGA 1155 0.4563 MDLSPPFTILEGTQGSYNKDNASVMEDEKSSHLNNLKQITNAKPPRNLSVMRHSISSTRLIAAADLSLDVEVVGSKSSSDEKAEFLPIFRSGSCAERGPKQYMEDEHICVDNLIEHLGSASDIPSHGAFYGVFDGHGGNDAAAYIRNNILRFIVEDPHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTALVFGRTLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQETHLSEDDEFLIMGCDGLWDVMSNQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIETPPRVRRSISAEGLNLLKGVLDCNS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2102 384 FunFam Probable protein phosphatase 2C 22 75 353 - -
Glsi08g2102 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Glsi08g2102 384 Gene3D - 70 353 IPR036457 -
Glsi08g2102 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Glsi08g2102 384 SMART PP2C_SIG_2 105 350 IPR001932 -
Glsi08g2102 384 PANTHER PROTEIN PHOSPHATASE 2C 67 348 IPR015655 GO:0004722|GO:0006470
Glsi08g2102 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Glsi08g2102 384 SMART PP2C_4 80 348 IPR001932 -
Glsi08g2102 384 CDD PP2Cc 89 350 IPR001932 -
Glsi08g2102 384 SUPERFAMILY PP2C-like 84 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2102 Glsi-ChrGlsi08 14730343 14732412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2102 1 381 PP2C-type Phosphatase Gene Family AT2G33700 74.740 0.0 577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2102 08 14730343 14732412 Glsi08g2102 08 14730343 14732412 ECH