Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2060 ATGACTATGGTTCTGTTTAGAGCGTTCCCTAGTCGTTCTTTTTCACCATGTAACTTGCTGCTACCTTTTGTAATATGGTTGGCTGTTTCCTGCAAAACCAAGGCTTTGATGAAAATACCACCAAATGTTTCAGTTCCAGCAGTCATAGCCTTTGGAGATTCCATCATGGACACCGGCAACAACAATCACATTAAGACTTTGGTTAAGAGCAATTTCCCTCCCTATGGAAAGGATTTTGAAGGAGGAATCCCAACCGGCCGATTTTGTAATGGAAAGATTCCATCCGACTTAGTAGTCGAAGAACTAGGTATTAAGGAGCTTTTGCCAGCATATTTGGATCCAAATCTCAAACCCAGCGATCTACCTACTGGCGTCTGCTTTGCCTCTGGTGCCTCAGGATATGATCCTTTGACACCCAAAATAGCGTCAGTCATACCAATGTCGGATCAAGTAAGCATGTTCAAAGAATACATAGAGAAGCTGAAAGGAAGCGTTGGGGAGGAGAGGACGAAGTTCATAATAGCCAACAGTCTTTATGTTGTGGTAGCAGGCAGCGATGATATTGCCAACACATATTTTGTTGCTCACGCTAGAGAGTTGCAATATGACGTTCCTTCTTACACTGACCTTATGGTCAACTCAGCCTCTGGTTTCTTAAAGGAAATATATCAACTTGGGGCAAGGAGGATTGCAGTGCTGAGTGCGCCACCAATTGGGTGCGTGCCATCACAGAGAACACTGGCTGGTGGGATAGTAAGACAGTGTGCAGAAAAGTACAATGACGCTGCAAAGTTATTTAACTTCAAACTGTCAAACGAGCTGATTTCCCTTAACCAGAATTTTCCCAATAGCAGGATGGTTTACGTTGATGTTTACAACCCTCTACTTGATATCATTCTCAACTACCAAAATTATGGCTACAAAGTGGTGGACAAAGGTTGCTGCGGCACAGGCGACCTTGAAGTTGCAGTGCTATGCAACCGTCTGTCTCCCACTTGTTCCGATGCTTCTGATTATGTTTTTTGGGACAGTTATCATCCTACAGAAAGAGTATACAGAAGGCTCATTACCCAAGCTCTTGAAAAGTATATGCCTCAGCTCCTTTCTTGA 1110 0.4351 MTMVLFRAFPSRSFSPCNLLLPFVIWLAVSCKTKALMKIPPNVSVPAVIAFGDSIMDTGNNNHIKTLVKSNFPPYGKDFEGGIPTGRFCNGKIPSDLVVEELGIKELLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKIASVIPMSDQVSMFKEYIEKLKGSVGEERTKFIIANSLYVVVAGSDDIANTYFVAHARELQYDVPSYTDLMVNSASGFLKEIYQLGARRIAVLSAPPIGCVPSQRTLAGGIVRQCAEKYNDAAKLFNFKLSNELISLNQNFPNSRMVYVDVYNPLLDIILNYQNYGYKVVDKGCCGTGDLEVAVLCNRLSPTCSDASDYVFWDSYHPTERVYRRLITQALEKYMPQLLS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2060 369 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Glsi08g2060 369 Pfam GDSL-like Lipase/Acylhydrolase 48 355 IPR001087 GO:0016788
Glsi08g2060 369 PANTHER GDSL ESTERASE/LIPASE EXL3 27 358 - -
Glsi08g2060 369 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 48 59 IPR008265 GO:0006629|GO:0016298
Glsi08g2060 369 FunFam GDSL esterase/lipase APG 37 364 - -
Glsi08g2060 369 CDD SGNH_plant_lipase_like 46 363 IPR035669 -
Glsi08g2060 369 Gene3D SGNH hydrolase 37 365 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2060 Glsi-ChrGlsi08 14458756 14461357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2060 42 361 Pollen Coat Proteome AT1G75910 41.486 3.18e-81 250