Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2027 ATGGAAACTCAACACCAACCCATCAAATCTAGGTTCCGACGCATCTGCGTCTTCTGTGGTAGCAGCCCTGGGAAGAACCCCAGCTACCAGCTCGCTGCTATTCAACTCGCAAAACAACTGGTCGAAAGGAACATTGACTTGGTGTACGGAGGAGGAAGCGTTGGGTTGATGGGTCTGATCTCACAAGCAGTCTTCGACGGTGGCCGCCACGTGTTAGGAGTGATTCCCAAGAGTCTAATGCCAAGAGAGATCACTGGAGAGACAGTAGGAGAAGTACGAGCCGTATCGGGGATGCACCAACGCAAGGCCGAAATGGCTCGACAAGCCGACGCATTTATCGCCTTGCCAGGCGGATACGGCACCCTCGAAGAATTATTAGAAGTCATCACCTGGGCTCAACTGGGAATCCACGACAAACCCGTGGGGTTGTTAAACGTAGATGGGTACTACAACTCACTGCTGTCATTCATAGATAAGGCAGTGGACGAAGGATTCATCGCACCGGCTGCCCGTCACATTATTGTGTCTGCCCAGACTGCCCAAGAGCTCATGTCCAAGCTCGAGGAATACGTGCCGAAGCACTGTGGTGTGGCCCCTAAGCTAAGTTGGGAGATGGAGCAACAATTGGTTCACACTGCCAAGTCCGACATTTATCGTTGA 660 0.5227 METQHQPIKSRFRRICVFCGSSPGKNPSYQLAAIQLAKQLVERNIDLVYGGGSVGLMGLISQAVFDGGRHVLGVIPKSLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARHIIVSAQTAQELMSKLEEYVPKHCGVAPKLSWEMEQQLVHTAKSDIYR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2027 219 PANTHER LOG FAMILY PROTEIN YJL055W 6 209 - -
Glsi08g2027 219 Gene3D - 3 189 - -
Glsi08g2027 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Glsi08g2027 219 Pfam Possible lysine decarboxylase 57 186 IPR031100 -
Glsi08g2027 219 NCBIfam Rossman fold protein, TIGR00730 family 14 190 IPR005269 GO:0009691|GO:0016787
Glsi08g2027 219 FunFam CASP-like protein 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2027 Glsi-ChrGlsi08 14265942 14267372 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0143 10 1049180 1052901 Glsi08g2027 08 14265942 14267372 CCT
Glsi08g2027 08 14265942 14267372 Glsi08g2027 08 14265942 14267372 ECH