Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2024 ATGGCTTTAAGAAAATCAAACAGACTTGCTCAAACAGCAGTTCTAAAGCAAATTCTGAAGAGATGCTCAAGTTTAGGGGGGAAACAGGGCTTTGATGAAGAAGGTCTCCCTTTGGACGTCCCCAAGGGCCACTTCGTTGTGTACGTTGGAGAAAACAGAAGCAGATACATAGTCCCAATTTCTATTCTAAATCGCCCAGAGTTCCAAAGCCTTCTCCATAAAGCAGAAGAAGAGTTTGGGTTTGAGCACGAAAGGGGTCTCACAATTCCTTGTGAAGAAGATGTTTTTGAGTCTCTTACATCCATGCTCGGATGA 315 0.4349 MALRKSNRLAQTAVLKQILKRCSSLGGKQGFDEEGLPLDVPKGHFVVYVGENRSRYIVPISILNRPEFQSLLHKAEEEFGFEHERGLTIPCEEDVFESLTSMLG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2024 104 Pfam Auxin responsive protein 34 103 IPR003676 GO:0009733
Glsi08g2024 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2024 Glsi-ChrGlsi08 14244887 14245201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2024 5 103 Calmodulin-binding Proteins AT4G34750 38.384 3.93e-19 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2024 08 14244887 14245201 Glsi09g0629 09 4337802 4339180 CCT
Glsi08g2024 08 14244887 14245201 Glsi08g2024 08 14244887 14245201 ECH