Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2023 ATGGACCGGCGCTGGCCCTGGAAGAAAAAATCATCTGATAAGGCAGTGCTTGAGAAAGTAGCTGCTGCGTTGGACTCTGTTAGTGCTTCCACTCAGGGCAATCAGGATAAGTACAAAAAGACTAACTATGTCCAAATTTCTGTGGAGTCATATTCACATCTGACTAATCTGGAGGACCAAGTGAAGACTCGTGAAGACAAAGTTCAGACACTGGAAGATGAGATCAAGGATTTGAATGAAAAGCTGTCAGAGGCGAATTTAGAGATGAATACCAAGGAAGACCTTGTAAAACAACATGCTAAAGTAGCCGAAGAAGCTGTCTCAGGCTGGGAAAAGGCGGAAGCAGAAGCTTTGGCATTGAAGAATAATCTAGAATCTGTCACTCTTTCAAAACTCACTGCTGAGGATCGTGCATCACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAATTTGAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTGGATAAAATTAAGGGCGAGCTTGAGGCAAAGATATTTAACTTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCCTTGCAGGAGCGCTCTAATATGCTAATCAAAATTAGCGAAGAGAAAGCTCAGGCTGAGGCTGAAATTGAGCTTCTGAAGGGCAACATAGAATCATGTGAAAGTGAAATCAATTCACTTAAATATGAACTTCATGTTGTTTACAAGGAGCTAGAAATTCGTAATGAAGAAAAGAACATGAGTATGAGGTCAGCAGAAGCTGCTAACAAGCATCATATGGAGGATGTTAAAAAAATTGCCAAGTTAGAGGGTGAGTGCCAAAGATTACGTGGTCTGGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCGCAAATGAAGCTAGAAGTTGAGAACCTAGGCCGAGATTATGGAGAAACTCGACTGAAGAGGTCACCTGTCAAGCCTGATAGTCCTCATCTGTCCCCCTTACCTGAGTTCTCCTCAGAGAATGTACAGAAATTCCAGAAGGAGAACAAATTTCTTACTGAACGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTTAAAGAAGCTTTGGCAAAACGTACCAGTGAATTGCTGGCCTCGAGGAGTATGTGTGCTAACACACTGAGCAAATTTCAAAGTTTGGAACTTCAGACACATAACCAGCAGAAAGGATTTCCAAAATCCGTCATCCAGATAACCCCTGAAAGTATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTAATGTCCATGTCTGAAGACGGAAACGATGATGTGGGAAGATGTGCTGAGTCTTGGCCTGTTATCTCAGAGATATCCCAATTCCAAAAAGAAAAGAATATTGACAAATCAAGCATATCTGAAACCACTAATAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCATCTGTCAAATGACTCCAATGGGCATATATCTATTTCGGTTTCTTCAAACAATACCACAACTGAAATTGTAACCAACAATGTATCAGAAATCAGTACTTGCATAGATGATCCCTCTGAAAAGCAGAGTGATTTAAATCCATTTCCAAATGAGGTCCCTTTTAGTGAGGTGTTACCAGCACCTGATCCCCGATCTGATGTTAATGGCTTGTCATTGACAGAGCTTCAATCAAGAATTTTAATGGTTTTCAAGTCCAAGTCTAGGGTTGCTGATATAGGGAAGGTCCTTGAAGATATTAAAAATATTCTGGAAGATGCACGTGACACTTCTATCCAGCACTCCGTAGGTTGCATTCCCCAGGATGTCCATCCTTCTGGTGCTGCATGTGACAGGCAGGTTAATCCTGAAGATGCTGGCCTAAATCCTGAAAAGGACACGACTTCATCCCAGAAAAAAACAGAAAATGTGCAGATAACTTCAGATTTGGAAGCTGCAATCTCTCATATACATGACTTTGTGTTGTTCCTTGGGAGAGAAGCGATGTCTGTTCATAACGTTACCTGTGATGGAGATGGAATGAACCGAAAGATTGAGGAGTTCTCTTTCACCTTTAATAAAGTTGTTTGCAATAAAGCAAGTTTGCTGCAGTTTGTTCTTGACCTGTCGTATGTATTAGCTAAAGCAAGTGAATTCAGATTTAATCTCCTTGGCTACAAGGGTACGGAAGCTGAAACTAACAGTCCTGATTGCATAGACAAGATTGCTTTGCCTGAAAATAAGTTAGCACAGGACAATTCATCGGGAGAAAGATATCAAAATGGTTGTTCTCATATTCTCAATCCTTGTTCTGATCTTGAGGTTCCAGACGATGGAAACTTAGTTTCAGGCTATGAATCAAATGCTACATCACAAAAATTCTCTATCGAGGAGTTTGAGAGATTGAAATTAGAGAAAGAGAAGGTGGCAATGGATCTGTCAAGATGCATTGAAACTCTTGACACGACAAAGTCTCAATTACAAGAGACTGAGCAATTTTTAGCAGAAGTTAAATCACAACTGGCTTCTTCACAAAGATCAAATGGCTTGGCTGAGACACAGCTGAAATGTATGGCAGAGTCATACAGGGCCCTTGAAACACGTGCACAGGAGTTAGAAACTGAGTTGAACCTTCTGCGAGTTAAGACAGAAAGTCTGGAGAACGAACTTCAAGATGAAAAGAAGGGCTGTGAAGATGCTTTGGCCAAGTCCAAGAAGCTAGAAGAGCAATTGCAAAGGATTGAAAGCTCAGCAGCTGATAATGACCTCAAGACTAAGCAGGAGAGAGATGTGGCAGCTGCTGCGGAAAAGCTAGCTGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTAAATTCTCTACGTCCTCAAACAGAGCCAGTTGGATCTCTGTACAGTGAGAGAAGTCCAATGGCTAATGGGTTTACAGAGGACGAGCCTACTACTAGTAACCCAAATTTGCAAGAGTTAGATCAGGATGAGATGGACAGTGCTACTTCTGCTTTTGTGCAAAGACTGGGTCCGGAGTCCCCCCTGCATTTTCCCAATAGCCTATGTAGTCCATCGGATAATGAGACAAACCTTCCGACTATAACTCCAGTAAAGCTTCCAAAACACAGGCCTACCAAGTCTGCTTCCTCGGTTTCTTCCACCCCTACACCAGAGAAACATGCCCGAGGATTTGGTAGATTTTTTTCATCAAAAGGAAAAGTTGGTCACTGA 3240 0.4179 MDRRWPWKKKSSDKAVLEKVAAALDSVSASTQGNQDKYKKTNYVQISVESYSHLTNLEDQVKTREDKVQTLEDEIKDLNEKLSEANLEMNTKEDLVKQHAKVAEEAVSGWEKAEAEALALKNNLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELEAKIFNLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEAEIELLKGNIESCESEINSLKYELHVVYKELEIRNEEKNMSMRSAEAANKHHMEDVKKIAKLEGECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGETRLKRSPVKPDSPHLSPLPEFSSENVQKFQKENKFLTERLLAMEEETKMLKEALAKRTSELLASRSMCANTLSKFQSLELQTHNQQKGFPKSVIQITPESIYSQNASNAPSLMSMSEDGNDDVGRCAESWPVISEISQFQKEKNIDKSSISETTNKLELMDDFLEVEKLAHLSNDSNGHISISVSSNNTTTEIVTNNVSEISTCIDDPSEKQSDLNPFPNEVPFSEVLPAPDPRSDVNGLSLTELQSRILMVFKSKSRVADIGKVLEDIKNILEDARDTSIQHSVGCIPQDVHPSGAACDRQVNPEDAGLNPEKDTTSSQKKTENVQITSDLEAAISHIHDFVLFLGREAMSVHNVTCDGDGMNRKIEEFSFTFNKVVCNKASLLQFVLDLSYVLAKASEFRFNLLGYKGTEAETNSPDCIDKIALPENKLAQDNSSGERYQNGCSHILNPCSDLEVPDDGNLVSGYESNATSQKFSIEEFERLKLEKEKVAMDLSRCIETLDTTKSQLQETEQFLAEVKSQLASSQRSNGLAETQLKCMAESYRALETRAQELETELNLLRVKTESLENELQDEKKGCEDALAKSKKLEEQLQRIESSAADNDLKTKQERDVAAAAEKLAECQETIFLLGKQLNSLRPQTEPVGSLYSERSPMANGFTEDEPTTSNPNLQELDQDEMDSATSAFVQRLGPESPLHFPNSLCSPSDNETNLPTITPVKLPKHRPTKSASSVSSTPTPEKHARGFGRFFSSKGKVGH 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2023 1079 Coils Coil 825 845 - -
Glsi08g2023 1079 Coils Coil 138 198 - -
Glsi08g2023 1079 MobiDBLite consensus disorder prediction 619 647 - -
Glsi08g2023 1079 Coils Coil 54 95 - -
Glsi08g2023 1079 MobiDBLite consensus disorder prediction 1021 1037 - -
Glsi08g2023 1079 Coils Coil 349 376 - -
Glsi08g2023 1079 Coils Coil 860 922 - -
Glsi08g2023 1079 MobiDBLite consensus disorder prediction 981 995 - -
Glsi08g2023 1079 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1074 - -
Glsi08g2023 1079 Coils Coil 252 272 - -
Glsi08g2023 1079 Coils Coil 206 247 - -
Glsi08g2023 1079 MobiDBLite consensus disorder prediction 1013 1079 - -
Glsi08g2023 1079 Pfam Filament-like plant protein, long coiled-coil 92 966 IPR008587 -
Glsi08g2023 1079 Coils Coil 929 949 - -
Glsi08g2023 1079 MobiDBLite consensus disorder prediction 962 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2023 Glsi-ChrGlsi08 14232937 14237271 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0145 10 1058366 1062621 Glsi08g2023 08 14232937 14237271 CCT
Glsi08g2023 08 14232937 14237271 Glsi08g2023 08 14232937 14237271 ECH