Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2014 ATGGCTAGCAGAAGGGGTTGCAGAAAAGGGTTGCAACTAGCAGCAGCAGAACCCCTTTGCAAAAGTTTCTACTCGAGTGCCGTATGGCTAGCAACAAATGTTTTTAAGCAACTGCTTCTGTACTGTTTGGATGCCATCATGGACATGGGGGTACCTGTAATTCTTTCATTATCTATCTTCCTCCTATTCTTTATCCACAGCCGACTCAGAACAAAAAGAACAAGTACACCTCTTCCACCAGGTCCTCCGGGTCTTCCTCTCATTGGCAATCTACACCAGCTTGATAACTCAACCTCGCATTGCCATCTATGGCAACTCTCTAAGCGGTACGGGCCTCTCATGTCCTTGCGTCTGGGCATTAAGCCAACCCTAGTTGTTTCCTCCGCAAGAATGGCCAGACAAGTCATGAAAACCCACGACCTAGCATTTGCTAGCAGGCCACCCTTGCTTGGCCTTCAAAAATTGTCTTACATGGGCTTAGATGTGGGTTTCGCACCCTACGGCGACTATTGGAGAGAAATGAAAAAACTGTGTGTCCTCAACTTCTTCAGCTCTCGGCGCATCCGCTCCTCTGGTCCCATTCGAGAAGACGAGGTTGCGCGAATGATTAGGAAAATATCACAATCTGCCGCTTATGACAGAGTAATCAACTTGAACGAGACATTACTCTCCTTCGCAAGCACTTTAACTTGTAGGATTGCTTTCGGGAAGCGATACGAAGAAGACGAAGGAAGCGAAAGGAGTAGATTCCATGGACTGCTCAACGAAGCTCAGGCCTTGTTGGCGGAATTTTACTTCTCTGACTATTTACCGTGGTTGGGGTGGGTTGATAGACTTACAGGACTACTCGGGCGGCTAGAGAAGACCTTCAAGGAGCTGGATATGTTCTACCAACAAGTCATCGACGACCATCTGGATCCGGCCAGACCTCAAACCCACCAACAAGACATCATTGACATCTTTCTACGAATCATGGATGACCATTCCCTCTCGTTTGATCTCACTTTGGATCACATCAAAGCTGTGCTCATGAATATATTTATAGCAGGAACAGACACGAGTGCAGTGACAGTAATTTGGGCTATGACTTCACTAATGAAAAATCCCAGAGTGATGAATAAGGTTCAAGATGAAATCAGAAATACATATGGTGAGAAAGACTTTATAAGTGAAGATGACATTCAAAGGCTTCCTTATCTCAAAGCAGTGGTGAAGGAGACTTTGAGACTGTTCCCACCTTCGCCCTTGCTTGTGCCAAGAGAATCTATTCAAAGATGCAACATAGACGGGTACGAGATTCCCCCCAAAACTCTAGTGTTTGTGAATGCCTGGGCTATTGCAAGGGACCCCGAGGCCTGGGAAGAGCCAGAAGAATTTTATCGTGAAAGGTTCTTGGGGTGTTCAATAGACTTCAGGGGGCTTGATTTTGAGCTTCTCCCATTTGGAGCTGGGCGGAGAATCTGTCTGGCTATGCAGATGGGTGTAGCCACAGTGGAGCTTTCCCTCGCCAATCTTCTTCACTCGTTTGATTGGGAATTGCCTGCCGAAATTTGCAAGCAAGACATTGACACACAAGTCATACCAGGAATTACGATGCATAAGAAAAATGATCTTTGCCTTGTGGCCAACATCTATACCAAATAG 1644 0.4623 MASRRGCRKGLQLAAAEPLCKSFYSSAVWLATNVFKQLLLYCLDAIMDMGVPVILSLSIFLLFFIHSRLRTKRTSTPLPPGPPGLPLIGNLHQLDNSTSHCHLWQLSKRYGPLMSLRLGIKPTLVVSSARMARQVMKTHDLAFASRPPLLGLQKLSYMGLDVGFAPYGDYWREMKKLCVLNFFSSRRIRSSGPIREDEVARMIRKISQSAAYDRVINLNETLLSFASTLTCRIAFGKRYEEDEGSERSRFHGLLNEAQALLAEFYFSDYLPWLGWVDRLTGLLGRLEKTFKELDMFYQQVIDDHLDPARPQTHQQDIIDIFLRIMDDHSLSFDLTLDHIKAVLMNIFIAGTDTSAVTVIWAMTSLMKNPRVMNKVQDEIRNTYGEKDFISEDDIQRLPYLKAVVKETLRLFPPSPLLVPRESIQRCNIDGYEIPPKTLVFVNAWAIARDPEAWEEPEEFYRERFLGCSIDFRGLDFELLPFGAGRRICLAMQMGVATVELSLANLLHSFDWELPAEICKQDIDTQVIPGITMHKKNDLCLVANIYTK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2014 547 CDD CYP71-like 109 538 - -
Glsi08g2014 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Glsi08g2014 547 PRINTS E-class P450 group I signature 225 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 131 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 401 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 Pfam Cytochrome P450 79 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 SUPERFAMILY Cytochrome P450 79 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 FunFam Cytochrome P450 83B1 65 541 - -
Glsi08g2014 547 Gene3D Cytochrome P450 71 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PANTHER CYTOCHROME P450 71B11-RELATED 62 542 - -
Glsi08g2014 547 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g2014 547 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2014 Glsi-ChrGlsi08 14194120 14196002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g2014 62 541 Cytochrome P450 AT4G31500 48.240 1.08e-169 488