Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2008 ATGTCGCAAATGACCTCACGTCTTCTTGTTCCTTTGCTCTTTCACCTTCTCGTTGCCACCATACCATCTCCGACCGTAGCCGGCAATGGACAGTGGCAGCTCCTACAGAAGAGCATCGGCATTGTGGCCATGCACATGCAGTTACTGCACCACGACCGCGTCGTCATCTTCGACCGCACCGACTTTGGCTTATCTAACTTATCCTTGCCTAATGGCAAATGTCGTCAAAACCCAAAGGAGATGGTCGTCAAAACAGACTGCACAGCTCACGCCGTGGAGTACGACGTGGCATCTAATACTTTCCGGCCACTATTTGTCCAGACTAACGTCTGGTGTTCATCCGGCTCAGTGGCGCCCGACGGCCGTCTGATCCAGACTGGTGGGTTCAATGACGGAGATCGTACGGTGAGGGTGCTGAGTCCTTGCCCCACCTGTGACTGGCAAGAAGAGGACGGCGGACTCGCAACTCGTAGGTGGTACTCCACGAATCATATTCTGCCGGATGGACGGCAGATTATAATCGGTGGCAGAAGGGCATTCAACTATGAGTTTTATCCCAAAACGGATGCAGCAAATAGTTACAGTTTACCATTTCTGGTACAGACCAATGATGCCGGTGCTGAGAACAACTTGTACCCCTTTGTATTTCTGAACGTGGACGGCAACCTGTTTATCTTCGCCAACAACCGAGCCATCTTATTAGACTACAATAAGAACAGGGTGGTTCGGACCTATCCACAAATACCAGGTGGAGATCCAAGGTCTTATCCTAGTACAGGCTCCGCGGTCTTTTTACCTCTGAACAATTTACAAGCGCGCTCTATTGAAGCCCAGGTTCTAATTTGTGGTGGAGCCCCAAGAGGGTCCTTTGAGCAGACAAATCAGGGCAAATTTCTAGGAGCCTTGAAAACCTGTGCTCGGATGAAGATCACTGACCCCAACCCACAGTGGCTCATGGAGACAATGCCTGGAGCTAGAGTTATGAATGACATGGTACTACTTCCTAACGGCAACGTTTTGATCATCAATGGAGCAGCCGTAGGGACAGCTGGATGGGAAGCGGGACGGAACCCGGTGTTGAATCCGTTCCTTTATAAAACCAACGGCCCAGTCGGGTCTCGGTTTGAATTGCAAAAACCGTCCAATATTCCACGGATGTACCACTCCACAGCCGTTCTGCTTCGCGACGGTCGCGTACTCGTGGCCGGCAGCAATCCTCACATATTCTACAATTTCACTAATGTGTTATTTCCAACGGAAATGAGGTTGGAGGCGTTTTCTCCTTCGTATTTGGAGCCTGCCTTCTCCAATGTGCGTCCAAAAATGGTATCTCCTCCTTCTCAAGCCAAACTCAAGTATGCTCAGAAGTTGAAGCTACGATTCCAGGTGACAGCAACATTAGCTCAAAATTTGGTGTCGGTGACGATGTTGGCGCCTTCTTTTACCACGCACTCCTTCTCCATGAATCAGAGGATGTTAGTACTGGAGGCAAACAAATTGACAAATGTAGGGAAGTCTACCTACGAAGTTGAGGTCACCACCCCACCCTCGCCTATTCTTGCACCGCCCGGTTACTATCTACTATTCGTGGTCCATCAAGAAATTCCGAGCAACGGCATTTGGGTTCAAATCCTATAA 1638 0.4969 MSQMTSRLLVPLLFHLLVATIPSPTVAGNGQWQLLQKSIGIVAMHMQLLHHDRVVIFDRTDFGLSNLSLPNGKCRQNPKEMVVKTDCTAHAVEYDVASNTFRPLFVQTNVWCSSGSVAPDGRLIQTGGFNDGDRTVRVLSPCPTCDWQEEDGGLATRRWYSTNHILPDGRQIIIGGRRAFNYEFYPKTDAANSYSLPFLVQTNDAGAENNLYPFVFLNVDGNLFIFANNRAILLDYNKNRVVRTYPQIPGGDPRSYPSTGSAVFLPLNNLQARSIEAQVLICGGAPRGSFEQTNQGKFLGALKTCARMKITDPNPQWLMETMPGARVMNDMVLLPNGNVLIINGAAVGTAGWEAGRNPVLNPFLYKTNGPVGSRFELQKPSNIPRMYHSTAVLLRDGRVLVAGSNPHIFYNFTNVLFPTEMRLEAFSPSYLEPAFSNVRPKMVSPPSQAKLKYAQKLKLRFQVTATLAQNLVSVTMLAPSFTTHSFSMNQRMLVLEANKLTNVGKSTYEVEVTTPPSPILAPPGYYLLFVVHQEIPSNGIWVQIL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2008 545 PANTHER SECRETED PROTEIN-RELATED 12 544 - -
Glsi08g2008 545 SUPERFAMILY Galactose oxidase, central domain 92 432 IPR011043 -
Glsi08g2008 545 Pfam Galactose oxidase-like, Early set domain 439 544 IPR015202 -
Glsi08g2008 545 CDD E_set_GO_C 435 544 IPR015202 -
Glsi08g2008 545 Gene3D - 26 434 IPR037293 -
Glsi08g2008 545 Pfam Glyoxal oxidase N-terminus 44 284 IPR009880 -
Glsi08g2008 545 FunFam Aldehyde oxidase GLOX 26 437 - -
Glsi08g2008 545 SUPERFAMILY E set domains 435 544 IPR014756 -
Glsi08g2008 545 Gene3D Immunoglobulins 438 545 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2008 Glsi-ChrGlsi08 14169990 14171627 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2008 08 14169990 14171627 Glsi10g0158 10 1158693 1160324 CCT
Glsi08g2008 08 14169990 14171627 Glsi08g2008 08 14169990 14171627 ECH