Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1998 ATGAGTGACGGAGGTTGTTGTCCGACGATGGATCTGTTACGGTCGGAGCCAATGCAACTTGTGCAACTGATCATTCCAACTGAATCAGCTCACCGAGTCATCTCTTACCTTGGCGATCTCGGCCTCTTTCAATTCAAAGATCTTAATGCAGAAAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCACGCAAGCTACGGTTCTTTAAGGAGCAAATGGCAAAGGCTGGTGTCTCACCCTCAACAAGTTCCACATCAGATAAAGTTGATCTGGACAATTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTTGAGATTAATGCAAATAATGATAAGTTGCAGCACAGTTACAGTGAGTTGTTAGAGTATAAACTTGTTCTTCAGAAGGTTGGTGAGTTTTTCTCTTCAGCACAAAAAAGCGCAGCATCTCAGCAGAGAGAGCTTGAAGCAAAGAGCATTGTTGAAGGGTCTATTGACAGTCCATTATTATTGGAACAAGAGATGACAACAGACCCATCAAAGTCGATTAAGCTTGGGTTTATCAGTGGACTTGTTCCTAGAGAAAAGTCAATGTCTTTTGAAAGGATTTTATTTCGTACTACTAGGGGTAATGTGTTTCTAAAGCAAGCCATTATTGAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTGTTATCTTTTATTCTGGAGAGAGAGCCAAAGGTAAAATTCTGAAAATATGCGATGCTTTTGGAGGAAATCGTTATCCTTTTACAGATGACTTGGGTAAACAATATCAGATGATTACAGAGGTATCTGGAAGACTTTCAGAATTGAAGACTACCATTGACATTGGATTGCTGCATAGGAGTACTCTATTGCAGACAATTGGATATCACCACGAGCAGTGGAGCCTTCTGGTGAAGAATGAAAAATCCATTTATCATACTCTAAATATGTTTAGCATGGATGTGACTAAGAAATGTCTTGTCGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAATTGCATTGCAGCAGGCAACCATGGACAGTAACTCACAAGTTGGGGCTATATTTCAGGTTTTACAAACCAAGGAATCATCACCTACTTATTTCCGCACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAATACCGGGAGGCGAATCCTGGGATATACACAATCATCACATTTCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGCTTACTGCTGGCAACTTTATATTTCATAATCAGAGAGAAAAAATTTTCTAGTCAGAAACTTGGAGACATAATAGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATACAATGAATTCTTCTCTGTTCCATTTGAGCTATTTGGGCCATCTGCCTATGGATGTCGTGATCTTTCATGCAGGGATGCTGCCACAACAGGTCTAATAAAGGTGCATGGCACTTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAATTGCCATTTCTTAACTCTTTGAAGATGAAGATGTCAATCCTACTGGGTGTAGCTCAGATGAATCTTGGAATTATATTGAGTTACTATAATGCAAAATATTTTGGAAACGACATAAATATCTGGTACCAGTTTGTTCCCCAAATGATATTTTTAAACAGCCTATTTGGCTATCTTTCACTCCTCATAATTGTTAAATGGTGCACTGGATCTCAAGCGGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAAAAGCTCCTTCAACTTGTGTTATTATTGTTGGCACTTGTTGCTGTACCATGGATGTTGTTCCCGAAGCCCTTTCTCCTGAAGCAGCAACAGCAAGAAAGACATCAAGGTCAATCTTACTCTTTGCTTTACAGCATTGATGACCCTCTTGAATCAGAGCCTCATTGTATTCCCCATGACCATGAGGAGTTTGACTTCAGCGAGGTTTTTGTGCACCAACTTATACATACCATAGAATTTGTGCTTGGAGCAGTATCTAATACAGCTTCATATTTACGTTTGTGGGCCCTCAGTCTAGCTCATTCAGAGCTATCAAGCGTATTCTATGACAAAGTTCTACTTCTGGCCTGGGGGTTCAACAACATCATCGTTCTCATTGTTGGCATTATTGTTTTCATATGCGCAACTGTTGGCGTGCTACTGGTCATGGAAACTCTAAGTGCCTTTTTGCATGCTTTGAGGCTTCACTGGGTTGAGTTCCAGAACAAGTTTTATGAGGGAGATGGTTACAAGTTCTGCCCATTTTCGTTTGCATTACTTAGGGACGAGGATGAATTATAG 2454 0.4026 MSDGGCCPTMDLLRSEPMQLVQLIIPTESAHRVISYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMARKLRFFKEQMAKAGVSPSTSSTSDKVDLDNLEVKLAELEAELLEINANNDKLQHSYSELLEYKLVLQKVGEFFSSAQKSAASQQRELEAKSIVEGSIDSPLLLEQEMTTDPSKSIKLGFISGLVPREKSMSFERILFRTTRGNVFLKQAIIEHPVLDPLSGEKVDKNVFVIFYSGERAKGKILKICDAFGGNRYPFTDDLGKQYQMITEVSGRLSELKTTIDIGLLHRSTLLQTIGYHHEQWSLLVKNEKSIYHTLNMFSMDVTKKCLVAEGWCPVFATNQIQIALQQATMDSNSQVGAIFQVLQTKESSPTYFRTNKFTSAFQEIVDAYGVAKYREANPGIYTIITFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDLSCRDAATTGLIKVHGTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYYNAKYFGNDINIWYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKLLQLVLLLLALVAVPWMLFPKPFLLKQQQQERHQGQSYSLLYSIDDPLESEPHCIPHDHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIIVLIVGIIVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFCPFSFALLRDEDEL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1998 817 Coils Coil 91 125 - -
Glsi08g1998 817 PANTHER VACUOLAR PROTON ATPASES 12 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi08g1998 817 PIRSF ATP6V0A1 8 817 IPR026028 GO:0000220|GO:0046961
Glsi08g1998 817 Pfam V-type ATPase 116kDa subunit family 36 808 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1998 Glsi-ChrGlsi08 14065128 14071585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1998 10 816 Primary Pumps ATPases(2) AT4G39080 75.773 0.0 1275