Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1982 ATGTGTGCGTTTGTTCTCTCTTTGGCACTCAAACCAGCTTTTCATCAACTTGCTTACAAATGGGACTCAACTTTGAGGTTCAAAATCTCGTGCACTTCTTTTGAAAGGTTCCTATCTTGGAGGGACAACTTTGCTCTTTCACATGATCTCTCGGAAACAAATAACGGAAACTTTACACTTTTCAACATTGATGGAGTTCTTAGTGAAGTCCTCCGTTCCGGGTTTATGATAAATTCATCCCTCAGGCGCAGGACCCACTTAGTTCAATCTTTCTCTGTTGTCTTCCTCCATTGGTTCTATAGCTCTGGTTCTGAAGAGGATTTGCAGCTTCTGATGTTACAAAGAAAAAGGAAGAGGATGCAATCCAATCGCGAGTCAGCGAGGCGATCTCGGATGCGAAAGCAGGAGTATTTAGAAGATCTGCTGGTACAAGTGGGTCGGCTCAGAAAGGACAATAGCGAAATGCTCGCAAGCCTAAACATCACCACACAGTATTATCTGAATATTGAGGCACAGAATTCCATTTTGAGGGCCCAGGTGGCGGAACTTAGCCAAAGGTTACAGTCACTAAATGAAATCCTCAACCTCGTCAACACAACAACTGATAGCAATATAACAGGTGCAGAGAATTTCTCGAATCCCACGAACATGCTGCATCTCAACCAACCCATTATGACTTCTGCAAACATTTTCCAGTGGTGA 702 0.4345 MCAFVLSLALKPAFHQLAYKWDSTLRFKISCTSFERFLSWRDNFALSHDLSETNNGNFTLFNIDGVLSEVLRSGFMINSSLRRRTHLVQSFSVVFLHWFYSSGSEEDLQLLMLQRKRKRMQSNRESARRSRMRKQEYLEDLLVQVGRLRKDNSEMLASLNITTQYYLNIEAQNSILRAQVAELSQRLQSLNEILNLVNTTTDSNITGAENFSNPTNMLHLNQPIMTSANIFQW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1982 233 Gene3D - 114 167 - -
Glsi08g1982 233 FunFam BZIP transcription factor 113 164 - -
Glsi08g1982 233 CDD bZIP_plant_GBF1 116 164 IPR045314 GO:0003700|GO:0006355
Glsi08g1982 233 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 118 133 IPR004827 GO:0003700|GO:0006355
Glsi08g1982 233 SUPERFAMILY Leucine zipper domain 115 168 IPR046347 GO:0003700|GO:0006355
Glsi08g1982 233 Coils Coil 110 130 - -
Glsi08g1982 233 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 160 IPR004827 GO:0003700|GO:0006355
Glsi08g1982 233 PANTHER BZIP TRANSCRIPTION FACTOR 44 103 228 - -
Glsi08g1982 233 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
Glsi08g1982 233 Coils Coil 166 200 - -
Glsi08g1982 233 Pfam bZIP transcription factor 115 160 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1982 Glsi-ChrGlsi08 13958644 13961291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1982 111 233 bZIP Transcription Factor Family AT4G34590 48.175 2.46e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1982 bZIP_1 1.3e-09 CL0018