Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1979 ATGTTCAAATCTCTGGACCTCCCGGATTGTGTGTATACCAAGCAGCCTATCACAATCTTCCCAAGTGGTCCGACTCCAAAGCATTATCTCTATCTCTCAAACCTTGACGACCAAAAGTTCCTCAGGTTCTCCATTAAGTATTTGTACCTGTTCAAGAAGTGTGTGAGCTTGGATGCGTTGAAGTGTTCTCTGTCAAGAGTTCTGGTGGATTATTACCCATTAGCTGGGAGGTTGCGGGTAGCTGCTGAGGACGATGGGAAACTCCTGGTGGATTGCAATGGAGAAGGTGCTTTATTTGCCGAAGCCTTCATGCCCACCACCGCCCAAGAATTACTTGAATCTTCCAATATCCCCAACAAGTCCTGGAGGAAGCTCTTGTATAAGCTGGAAGCTCACAGTTTCTTGGACCTTCCTCCTCTTATAGTCCAGGCGACGAGTCTCCGTTGTGGGGGAATGGTGCTGTGCACCGCCATTAACCACTGTCTATGTGATGGCATCGGCACCTCTCAGTTTTTGCACGCATGGGCCCAACTTACCACCAAACCTGACGCTCATTTACCAATCTTGCCCCTCCACGCTCGACACGTGCTAAAGCCTCGAAATCCCCCCCAGGTTAAATTCCCTATCCCCGGATACACCAAAGGTAACCCCACTCATCAGGTGGACCTGGTCAAGTTACTACAGTCGCGCCCTCTGGTGGCCACGTCCTTCACCTTCACCCCATCTCGGGTGCTTCAACTCAAGAAGCAGTGCGTGCCGTCGCTAAAGTGCACCACCTTTGAAGCTCTGGCTACGCACACATGGCGCTCCTGGGTTAGGTCACTGGACCTATCCCCCACACTCAATGTGAAGCTCCTTTTCTCAGTCAACATTCGGAAAAAGGTGAAGCCAGAAATACCACAAGGCTATTACGGGAATGGATTCGTACTAGGATGCGCGGAGAGTAGAGTAGAGGAGTTGGTGAGACCTAACATGCAGCATGGCGTGAAAGCGGTGCAAGAAGCCAAGGCTAGGGTGGATGATGAGCATGTGAGGTCAATGATTGATTTGTTGGAGGACAAAAGCGTAAAAACGGATGTTTCGTCTAGCATGGTTATATCGCAGTGGTCAAAGCTAGGGTTAGAGGAGGTGGACTTTGGAGAGGGGAGGCCACTGTACATGGGACCTTTGACTAGTGACATTTACTGCTTGTTTTTACCCGTGATGGGTGATTCTGATGCGGTGAGAGTGCTCGTGTCAGTGCCAGAGGCTTTGGTTGACAGATTTGACTATTATATGGTCAAAGAGTATTTTTTGGATATAGAAGAAGACGGACGTCTTCAAAATGGGTATCAATATCATGCACAACATAATGTCTTATCTGAATGA 1368 0.489 MFKSLDLPDCVYTKQPITIFPSGPTPKHYLYLSNLDDQKFLRFSIKYLYLFKKCVSLDALKCSLSRVLVDYYPLAGRLRVAAEDDGKLLVDCNGEGALFAEAFMPTTAQELLESSNIPNKSWRKLLYKLEAHSFLDLPPLIVQATSLRCGGMVLCTAINHCLCDGIGTSQFLHAWAQLTTKPDAHLPILPLHARHVLKPRNPPQVKFPIPGYTKGNPTHQVDLVKLLQSRPLVATSFTFTPSRVLQLKKQCVPSLKCTTFEALATHTWRSWVRSLDLSPTLNVKLLFSVNIRKKVKPEIPQGYYGNGFVLGCAESRVEELVRPNMQHGVKAVQEAKARVDDEHVRSMIDLLEDKSVKTDVSSSMVISQWSKLGLEEVDFGEGRPLYMGPLTSDIYCLFLPVMGDSDAVRVLVSVPEALVDRFDYYMVKEYFLDIEEDGRLQNGYQYHAQHNVLSE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1979 455 Pfam Transferase family 14 422 - -
Glsi08g1979 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 417 - -
Glsi08g1979 455 Gene3D - 11 214 IPR023213 -
Glsi08g1979 455 Gene3D - 225 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1979 Glsi-ChrGlsi08 13945010 13946563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1979 21 389 Monolignol Biosynthesis Gene Families AT5G48930 28.426 2.92e-45 161