Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1960 ATGCAGGTACACCGTTCAATATGCTTAGAGCTTAAGAAATTTATTCACCGAATTTCGCATATACTATTAGCCATTGAATCCACCCGACCAAACTGTGCGTTAGCAGTTCAGGCATTGTGTTCCCTGCACTTCACTTTGGACAAAGCCAAGTTTGTTATCCAGCAATGTTCTCAGTCCAGTAAACTCTACCTGGTAATCAAGGCGCATAGGATAGTTTCAAGATGTGAAAAAATACGAAGTGATTTGGAGTTGTACTTGACCCAAATTCATGAAATGGTCCCAGTTTTGTTGGATGCTAAGATATCTGGAATCCTACATGATCTTAGAGCTGCAGAATTTTCCTTGGAATTTGCGGAAGATGAAGCTAGGAAGGCAATACTGGAACTGCTTGAGAACAATTTGCCTGTTTCAGAATCTATGAACAATTCAGAACTTGATGCTGTTCGGATAGCAACCTTGAGGTTGAAAATCACATCTCCATTTACTCTCTTAGTGGAGAAAGGAGCCCTTAAGTTGCAACTTGACAAGGTCAATGACACGGACCAAAGAGAGAAGGAACTTCTGAAATATCTTCTATATCTTCTGATCAAATATAGGAAATTCATTTGTCTGATTCAAACTGGAAGCGAATGTCATCATCAGCCTTTGGATGATAATCAACAAACTAACTCAGTCAACCCTCAAGTTGGAGATTCCTGA 699 0.3977 MQVHRSICLELKKFIHRISHILLAIESTRPNCALAVQALCSLHFTLDKAKFVIQQCSQSSKLYLVIKAHRIVSRCEKIRSDLELYLTQIHEMVPVLLDAKISGILHDLRAAEFSLEFAEDEARKAILELLENNLPVSESMNNSELDAVRIATLRLKITSPFTLLVEKGALKLQLDKVNDTDQREKELLKYLLYLLIKYRKFICLIQTGSECHHQPLDDNQQTNSVNPQVGDS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1960 232 Coils Coil 108 128 - -
Glsi08g1960 232 Gene3D - 1 93 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1960 Glsi-ChrGlsi08 13828487 13829428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1960 2 172 U-box Gene Family AT4G36550 40.351 1.72e-37 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1960 08 13828487 13829428 Glsi09g0572 09 3979602 3981441 CCT
Glsi08g1960 08 13828487 13829428 Glsi08g1960 08 13828487 13829428 ECH
Glsi09g0572 09 3979602 3981441 Glsi08g1960 08 13828487 13829428 ECH