Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1956 ATGAGACCCGACAGCAACAAACACAACCTCACAATCCTCGGGCCTCGTAAGATGGTTGAGAAAACGGAAGGGGAAGGAAAAGAAGAAGAAGAAGTGGTACAGCAACCAGCAGCTTCCATAGCAGAAGAAGGTACGGAGAGCTCGCTGAAGAAAGGCAAAACCAGCGAGGAAGAGGGAGTGTCCGAGGAGAATGTCCACTGTGACTGCTCCCGAACATTTATAAGCATTTCTGCTTATTTTCGACCTGAAGACTTCAAGGGTGGAAACTTTCCCTCCCTTGGGGGCATCGATGAGCCTGCATCAGAATTTTTCTTTTGGCTCTTGACCATGGCCTCAAGCTCCACTTGGACAGCAAAGCAAAACAAAAAATTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCTGATCGGTGGCAGAAACTGGCCAGAGCGGTGGGAGGGAAGACGGTGGAGGAAGTGAAGAGGCACTACGAGAAGCTCGTGGAAGATTTGAAGCAGATTGAGGAAGGCCATGTGCCCTTGCCCAATTACTTGGACGATGAACAAAGGTTTATTCTTACTCCCACTAACAGTAACAGGACACTTGTGGATTTGCTTGAGAAGATTTACATTGTGGCCTATATACTCTGA 633 0.4818 MRPDSNKHNLTILGPRKMVEKTEGEGKEEEEVVQQPAASIAEEGTESSLKKGKTSEEEGVSEENVHCDCSRTFISISAYFRPEDFKGGNFPSLGGIDEPASEFFFWLLTMASSSTWTAKQNKKFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEKLVEDLKQIEEGHVPLPNYLDDEQRFILTPTNSNRTLVDLLEKIYIVAYIL 210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1956 210 SUPERFAMILY Homeodomain-like 116 169 IPR009057 -
Glsi08g1956 210 ProSiteProfiles Myb-like domain profile. 114 162 IPR001005 -
Glsi08g1956 210 Coils Coil 151 171 - -
Glsi08g1956 210 SMART sant 112 164 IPR001005 -
Glsi08g1956 210 Gene3D - 109 175 - -
Glsi08g1956 210 CDD SANT 115 162 IPR001005 -
Glsi08g1956 210 ProSiteProfiles SANT domain profile. 111 166 IPR017884 -
Glsi08g1956 210 MobiDBLite consensus disorder prediction 18 32 - -
Glsi08g1956 210 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 111 181 IPR044636 GO:0003700
Glsi08g1956 210 MobiDBLite consensus disorder prediction 1 60 - -
Glsi08g1956 210 FunFam Transcription factor SRM1 108 175 - -
Glsi08g1956 210 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g1956 Glsi-ChrGlsi08 13813857 13817833 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi08g1956 None None None