Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1940 ATGACTTCGGACGGAGCTACTTCGGCGGCAACAAGTCGGAGGAAGCCGTCGTGGAGGGAGCGAGAGAACAATAGGAGGAGAGAGAGGAAGAGGAGAGCCATGGCTGCCAAGATCTACTCTGGCCTCAGAGCTCAGGGGAACTACAATTTGCCCAAGCACTGTGACAACAACGAGGTCTTGAAGGCTCTATGCGCTGAAGCTGGTTGGACTGTCGAAGAAGACGGCACCACCTATCGCAAGGGATCCAAGCCACCCCCAACCGATACAACAGGCACTTCCACCAGAAACACCCCATTCTCATCTCAAAATCCTAGCCCTTTTTCTTCATCTTTTCCTAGCCCAATTCCTTCCTACCAAGTCAGCCCTTCCTCCTCCTCTTTTCCGAGCCCTTCTCGTTTGGATGGCAACAACGCATCAAATCTCATTCCATACATTCAAAATGTCATTCCTGCATCTTTGCCTCCCCTAAGAATATCGAGCAGCGCCCCCGTAACACCACCTCTCTCATCCCCAACATCAAGAAATCCTAAACCAATTCCCACATGGGAGTCAATAGCCAAAGAATCCATGGCTTCTTTCAATTACCCCTTCTTTGCAGCATCTGCCCCAGCTAGCCCTACTCACCGTCACCTTTATACCCCAGCCACTATACCTGAATGTGATGAATCTGACACTTTCACCGTTGAGTCTGGTCAATGGGTAAACTTCCAAGCATTTGCACCCTCTGCATCTGCAGTGCCAACCTCTCCGACCTTCAATCTTATTAAAACTGTTGTTCAGCACACACTGCCTGATAATGTAATCCAAGAAATGAGGAGAGGTTCAGAAGCACACTTTGGGGTACAAGTAAAGCCTTGGGTTGGAGAAAAAATTCATGAAGTAGGATTGGATGATCTGGAGCTCACACTTGGAAGTCGGAAGGCACGGAATTAG 933 0.4909 MTSDGATSAATSRRKPSWRERENNRRRERKRRAMAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGSKPPPTDTTGTSTRNTPFSSQNPSPFSSSFPSPIPSYQVSPSSSSFPSPSRLDGNNASNLIPYIQNVIPASLPPLRISSSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPATIPECDESDTFTVESGQWVNFQAFAPSASAVPTSPTFNLIKTVVQHTLPDNVIQEMRRGSEAHFGVQVKPWVGEKIHEVGLDDLELTLGSRKARN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1940 310 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 139 IPR008540 -
Glsi08g1940 310 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 309 IPR033264 GO:0003700|GO:0006351|GO:0009742
Glsi08g1940 310 MobiDBLite consensus disorder prediction 82 132 - -
Glsi08g1940 310 MobiDBLite consensus disorder prediction 75 132 - -
Glsi08g1940 310 MobiDBLite consensus disorder prediction 1 32 - -
Glsi08g1940 310 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1940 Glsi-ChrGlsi08 13727553 13729111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1940 1 309 BZR Transcription Factor Family AT1G75080 67.761 1.08e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Glsi08g1940 BES1_N 1.1e-60 No_clan